Lutra lutra (Eurasian river otter): 125082678
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Entry
125082678 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 2B-like
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125082678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125082678
04121 Ubiquitin system [BR:
llv04121
]
125082678
03036 Chromosome and associated proteins [BR:
llv03036
]
125082678
Enzymes [BR:
llv01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
125082678
Transcription factors [BR:
llv03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
125082678
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
125082678
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
125082678
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
125082678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
JHD
Cupin_8
JmjC
Motif
Other DBs
NCBI-GeneID:
125082678
NCBI-ProteinID:
XP_047554499
LinkDB
All DBs
Position
12:85040556..85164199
Genome browser
AA seq
1417 aa
AA seq
DB search
MRPPPATQPSKSQLCTQLPGGGGACVQGALVTQQQNSDARALTAPGASRAPSPPHTSSGS
RPRPPYPGPSAPSTSPAAGSERDRQQCLRSGDYDVDASPPTTAENGFLGLCKRICLSRPI
DRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKDFNYEYVQREALRVP
LIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPEA
QRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQTEATNAIAEMKYPK
VKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSD
IFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIE
DRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRESMLIDAPRKPSIDGFSSD
SWLEMEEESCEQQPQEEEKEEEEEEEEEEEEGAEKVPKPPADGPPSPSSTPSEDQEAPGK
KPKAPALRFLQRTLSDESEESVKSTTVPTDYPKTPTGSPATGVSAKWTHLTEFELKGLKA
LVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAITGVPVVTWPKKTPKN
RAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGP
GRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLMECSICNEIIHPGC
LKIKESEGVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEQKMNRDNKE
GQEPAKRRSECEEAPRRRSDEHPKKVPPDGILRRKSDDAHLRRKRKYEKPQELSGRKRAS
TLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKPGKEDKLFRKKRRSWKNAEDRM
ALANKPLRRFKQEPEDDLPEAPPKARESDHSRSSSPTAGPSTEGAEGPEEKKKVKIRRKR
RLPTKELSKELSKELNQEIQKTENSLANENHQPIKSEPESESEEPKRPLGLCERPHRFSK
GLTGPPRELRHQLGPGLRSPPRVISRPPPSVSPPKCIQMERHVIRPPPISPPPDSLPLDD
GAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRIDLNHCKSVTPLMLS
GIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLD
VQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITDASLRLIIRHMPL
LSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSFFKRCGNICHID
LRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgccgcctgcaactcagccctccaaaagtcagctctgcacacaactcccgggc
ggcggcggcgcctgcgtgcaaggcgcactcgtgacccaacaacaaaacagcgatgccagg
gcgctaacggcgcccggtgcctcccgggcaccctccccgccccacacctcctcgggcagc
cgcccccgccccccctatcccgggccgagtgccccctccactagcccggccgcgggctca
gagcgcgatcggcaacaatgtttacgttccggggattatgacgtcgacgcctcccccccc
acaactgctgaaaatggtttcctaggactttgcaaacggatctgcttaagtcgtccgatt
gaccgccagagatacgacgagaacgaggacttgtcggacgtggaggagatcgtcagcgtc
cgcggcttcagcctggaggagaagctgcgcagtcagctgtaccagggggacttcgtgcac
gccatggagggcaaagatttcaactatgaatacgtgcagagagaagctctcagggttccc
ctgatatttcgagaaaaggatggactggggattaagatgcctgaccccgatttcacagtc
cgagatgtcaaactcctagtgggtagccggcggctggtggacgtgatggacgtgaacacc
cagaagggcacggagatgagcatgtcccagtttgtgcgctactacgagactccggaggcc
cagcgggacaagctgtacaacgtcatcagcctcgagttcagccacaccaagctggagcac
ctggtcaagcgtccgactgtggtagatctggtggactgggtggacaacatgtggccccag
catttgaaggagaagcagacggaagccacaaatgccattgccgagatgaaatacccgaaa
gtgaagaagtactgtctgatgagcgtgaaaggctgtttcactgacttccacatcgacttc
ggaggcacttctgtttggtaccatgttttccggggtgggaagatcttttggctgattcct
ccaaccctgcacaatttggcactgtacgaggagtgggtgctgtcaggcaaacagagtgac
atcttcctgggagaccgcgtggagcgatgccaaagaattgagctgaaacagggctacacg
tttttcatcccttccggttggatccatgccgtctacacccctgtagactctctggtattt
ggcggaaacatcctgcacagctttaacgtgcccatgcagctgcggatctacgagatcgag
gacagaacacgggtgcagcccaaatttcgctaccccttctactatgagatgtgctggtat
gtcttggaaagatacgtgtactgtgtgacccagcggtcctacctcactcaggaataccag
agagaatcaatgcttattgatgccccgagaaagcccagcatagacggcttctcatctgat
tcctggctggagatggaggaggagtcctgtgagcagcagcctcaagaggaagagaaggag
gaggaggaggaggaggaggaggaagaggaggagggtgcagagaaggtgcccaagccacct
gccgacggccccccgtcgccctccagcaccccctcagaggaccaggaggcccccgggaag
aagccgaaagcacctgctctgcgattcctccaaaggactttgtctgacgagtcagaggaa
agtgtgaagtccacgacggtgcccaccgactaccccaagacgcccaccggctcccctgcc
acgggggtctccgccaagtggacccacctcactgagtttgagttgaagggcctgaaagcg
ctggtggagaaactggaatccctcccagagaacaagaagtgtgttcccgagggcatcgag
gacccccaggcactcctggagggtgtgaagaatgtcctgaaggagcacgcggatgacgac
cccagtctggccatcactggggtccctgtagtcacttggccaaagaagacaccaaagaac
cgggcagtagggcggcccaaggggaagctgggcccggcctccgccgtgaagttggccgcc
aaccggacgacggcgggagctcgccgacgccggacgcgatgccgcaagtgcgaggcctgc
ctgcggaccgagtgcggagagtgccacttctgcaaggacatgaagaagttcgggggcccc
gggcggatgaagcagagctgtatcatgcggcagtgcatcgcgccagtgctgccccacact
gccgtgtgcctggtgtgtggcgaggcagggaaggaagacacggtggaagaggaagaagga
aagtttaacctcatgctcatggagtgctccatctgcaatgaaatcatccaccctggatgc
cttaagattaaggaatcagagggcgtagtcaacgatgagcttccaaactgctgggagtgt
ccaaagtgtaaccacgccggcaagaccgggaaacaaaagcgtggccctggctttaagtat
gcctccaacctgcccggctccctgctcaaggagcagaagatgaaccgggacaacaaggaa
gggcaggagcctgccaagcggaggagtgagtgtgaggaggcacctcggcgcaggtcagac
gaacaccccaagaaggtaccccccgacggcatcctgcgccgaaagtcggacgatgcgcac
ctgaggaggaagcggaaatacgagaagccccaagagctgagtggacgcaagcgagcctcg
acgcttcaaacgtcccccggttcctcctctcacctctcgccgaggccccctctaggcagc
agcctcagcccctggtggagatccagtctcacttacttccagcagcagctaaaacctggc
aaagaagataagcttttcaggaaaaagcggcggtcttggaagaacgcggaggaccggatg
gctcttgccaacaagcctctgcggcgcttcaagcaggagccagaggatgacctgcctgag
gcgccccccaaggcccgggaaagcgaccactcccgctccagctcccccaccgcggggccc
agcaccgagggggcagagggccccgaggagaagaaaaaggtaaagatacgcaggaaaagg
cggcttcccaccaaggagctgagcaaggagctgagcaaggagctgaaccaagagatccag
aagacggagaacagcctggccaacgagaaccaccagcccatcaagtcagagcccgagagt
gagagcgaggagcccaagcggcccctgggcctctgcgagcgcccccaccgcttcagcaag
gggctcaccggccctccccgggagctgcggcaccagctggggcccggcctacgcagccca
ccccgtgtcatctcccggccccctccctccgtgtccccgcccaagtgcatccagatggag
cggcacgtgattcggccaccccccatcagccccccacctgactcactgcccctggatgat
ggggcagcccatgtcatgcacagggaggtgtggatggccgtcttcagctacctcagccac
caagacttgtgtgtctgcatgcgggtctgcaggacctggaaccgctggtgctgcgacaag
cggttgtggacccgcatcgatctgaaccactgcaagtccgtcacacccctgatgctgagc
ggcatcatccggcggcagcctgtctccctggacctcagctggaccaatatctccaagaaa
cagctgagctggctcatcaaccggttgcctgggctccgagacctggtgctgtcgggctgc
tcatggatcgcggtctcagctctctgtagctctagctgtccactgctccggaccctggat
gtccagtgggtagaaggactaaaggatgcccagatgcgggatctcctgtccccacccaca
gataacaggccaggtcagatggacaaccggagcaagctccggaacattgtggagctgcgt
ctagcgggcctggacatcacggatgcctccctgcggctcatcatccgccacatgcccctg
ctctccaagctccaccttagttactgtaatcacgtgaccgaccagtccatcaacctgctc
actgccgtgggcaccaccacccgagactccttaactgaaatcaacctatcagactgcaat
aaggttactgaccagtgcctgtccttcttcaaacgctgtggaaatatctgtcatattgac
ctgaggtactgcaagcaggttaccaaggaaggctgtgagcagttcatagctgaaatgtct
gtgagtgtccagtttgggcaagtggaagaaaaactcctacagaaactgagttag
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