Lagopus muta (rock ptarmigan): 125693049
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Entry
125693049 CDS
T09141
Symbol
PBX1
Name
(RefSeq) pre-B-cell leukemia transcription factor 1 isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125693049 (PBX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125693049 (PBX1)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125693049 (PBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
YdaS_toxin
HTH_3
UCH
LZ3wCH
EF-hand_2
Motif
Other DBs
NCBI-GeneID:
125693049
NCBI-ProteinID:
XP_048800405
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Position
5:complement(24190409..24298610)
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AA seq
430 aa
AA seq
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MDEQPRLMHTHSGVGMPGHPGLSQHMQDGPGGAEGEAGRKQDIGDILQQIMTITDQSLDE
AQARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAGP
EKGGGSAAAAAAAAASGGAGSDNSVEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVM
NLLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNF
NKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQE
EANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSLNGDSYQG
AQVGANVQSQVDTLRHVISQTGGYSDGLAASQMYSPQGISANGGWQDATTPSSVTSPTEG
PGSVHSDTSN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagccgcggctgatgcacacgcacagcggggtggggatgccgggccacccg
ggcctgtcccagcacatgcaggatggaccaggcggggcggagggggaggcaggcaggaag
caagacatcggagacatcttacagcagatcatgaccatcacggaccagagtttggacgag
gcgcaggccaggaaacacgctttaaactgccacaggatgaagccggctctttttaatgtc
ttgtgtgaaatcaaagaaaaaacagttctgagcatccggggagcacaggaagaggagccc
acagacccgcagctgatgcggttagacaacatgctgctggccgagggcgtcgcgggcccc
gagaaaggagggggttctgctgctgccgccgccgctgctgccgcatcgggaggagctgga
tccgacaactcggtggagcactctgattacagagccaagctgtcccagatccggcagatc
taccacacggagctggagaagtacgagcaggcatgcaacgaattcaccacccacgtgatg
aacctgctgcgtgagcagagccggacccggcccatctcaccaaaggagatagagcggatg
gtgagcatcatccaccgcaaattcagctccatccagatgcagttgaagcaaagcacgtgt
gaagccgtcatgatcttgcgctcccgatttctggatgcacggcggaagagaagaaacttc
aacaagcaggctacggaaatcctgaatgagtatttctattcccatctcagcaacccttac
cccagtgaggaagccaaagaagagctagccaagaaatgcggcatcacagtctcacaggta
tcaaactggtttggaaataagagaatccggtacaagaagaacataggtaaatttcaagag
gaagccaatatttatgctgccaaaacggctgtcacggctaccaatgtgtcagcccatgga
agccaggctaactcaccctcaactcccaattcagctggttcttccagttcttttaacatg
tcaaactctggagatttgttcatgagcgtgcagtctctcaatggggattcttaccaaggg
gcccaggttggagccaacgtgcagtcacaggtggatacccttcgccatgttatcagccag
acaggaggatacagtgacggactcgcagcaagtcagatgtatagtccgcagggcatcagt
gctaatggaggttggcaagacgctactaccccatcgtcggtgacctcccccacagaaggc
cctggcagcgttcactctgatacctccaactga
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