Lactococcus raffinolactis: CMV25_10870
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Entry
CMV25_10870 CDS
T05231
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lrn
Lactococcus raffinolactis
Brite
KEGG Orthology (KO) [BR:
lrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrn03016
]
CMV25_10870
Enzymes [BR:
lrn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CMV25_10870
Transfer RNA biogenesis [BR:
lrn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CMV25_10870
Prokaryotic type
CMV25_10870
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ATC62329
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All DBs
Position
complement(2207636..2208532)
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AA seq
298 aa
AA seq
DB search
MTVNGILNIYKEAGMTSHDVVFKLRKILQTKKIGHGGTLDPDVTGVLPIAVGKATRVIEY
MTEAGKIYEGQVTLGFSTETEDASGTVVASTPVVNVPTTTEIDAAMADFVGKITQIPPMY
SAVKVNGRKLYEYARAGETIERPQRQVTISEFARTSEPTFDAANGLVNFDFRVVCSKGTY
VRTLAVDLGAKLGYASHMSYLQRTASAGLTIDKAFKLSEIEQLKAEDRLDEAFLPIEYGV
SDLEKVELTPEQVSEIGFGRFVTIIAEHRTVAGMQNGQLIAILEQRDGQLYKPKKVIK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaacggaattttaaatatctataaagaagccggcatgaccagtcacgatgtc
gttttcaaactgcgcaaaatcttgcagacgaaaaaaataggtcatggcgggactttagat
cctgacgtgactggcgtcttgccgattgcggtaggcaaggcaacgcgcgtgattgagtac
atgacggaagctggcaagatctatgagggtcaagtgaccctaggcttttcgactgaaaca
gaagacgcaagtggtacagtggtcgcctctactcccgttgtaaacgtgccaacgaccaca
gagattgatgctgccatggccgactttgtcggcaaaatcacgcaaattccacccatgtat
tcggcggtcaaggtcaatggtcgcaagctctatgagtatgcacgcgctggtgagacgatc
gagcgaccgcagcggcaggtaacgatttccgagtttgctagaacgtctgagcccactttc
gatgcggcaaatggtcttgttaactttgacttccgtgttgtttgtagcaagggtacctat
gtcagaacactggctgttgatttgggggctaaacttggctatgccagtcatatgtcttac
ctgcagcggacggcatcagctggcttgaccatcgacaaggcctttaagttatcagaaata
gagcaactcaaagctgaggatcgtttagacgaggcgttcttgcctatcgaatacggtgtc
tctgatttagaaaaagtcgagctgacacctgagcaagtttcagaaatcggctttggccgt
ttcgtcacgattatagctgaacatcgaactgttgcaggcatgcaaaatgggcaactcatt
gcgattctagaacaacgagatggtcaactttataaacctaagaaggtaattaaatga
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