Labeo rohita (rohu): 127153478
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Entry
127153478 CDS
T09007
Symbol
tcf3b
Name
(RefSeq) transcription factor 3b
KO
K09063
transcription factor E2-alpha
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127153478 (tcf3b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
127153478 (tcf3b)
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GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
127153478
NCBI-ProteinID:
XP_050950492
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Position
22:29031515..29063166
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AA seq
650 aa
AA seq
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MNEAHQRMATVGTDKELSDLLDFSAMFAPPVANGKNRPTTLASSQFSGSGMEERSSPWAA
GEQNSPSFNQNYGEGSHYNEHDGLSSPFLGTGISGKNERGPYSSFGGQPGFIPSDIAMPS
ADAMSPSGLKSGSQFYQSYPNNPRRRPSDGSMDPQPKKIRKPPGLPSSVYAATSGDDYIR
DSAAYPGSKPGSVYPGSFYMQEGLHSSSDPWAPSGSIGQSGYSAMLGNSPHINQPGSFSA
INPQDRMNYPLHGADVNGFHSGSTAYSHTSSMNGSDSILASRGSVASSSGDEIGKALASI
YPSDHNSNNFSSTPSTPVGSPQGIATGAAQWSRASGQTALSPNYEGGLHALQNKMEDRLE
EAIHVLRSHAVGQPPGIPGAHPDMHGLLGAVSTSSGSIGGLPQTYSNPGLPLSNRHPAMA
GSHHDDHACLPPSSTLLQSAHASGTPQPGGAPEGFNSLPGGLAHATHSSNKSDIKREDKE
DDENSSVADKSEEEKKESKPSRTRTRKEVFTHQVLSGVSDQGEDPDNEDDEDLPAEVKIE
REKERRVANNARERLRVRDINEAFKELGRMCQLHLSNDKPQTKLLILHQAVNVILNLEQQ
VRERNLNPKAACLKRREEEKVSGVVGDSQMQLSGPHPGLGGDGRNSVSHM
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggcgcaccagagaatggctacagtgggaacagataaagaactcagtgacctg
ttggatttcagtgcgatgtttgcaccccccgtggcgaatgggaagaacagaccaaccaca
cttgctagcagtcaatttagtggttcaggcatggaagaacgcagtagtccctgggctgct
ggagagcagaacagtccttcttttaaccagaactatggagagggctcacactacaacgaa
catgatggactatcttctccattccttggcacaggaattagtggcaagaatgaaagaggt
ccatactcttcctttggaggccagcctgggttcataccctcagacatcgccatgccttct
gcagatgccatgtctccatccggactgaagtctggctcacagttttaccagtcatacccc
aacaacccccggagacgcccctcagatggaagcatggatccccaaccaaaaaagatcagg
aagccaccaggactgccatcttcagtttatgctgccacctctggtgacgactatatccgt
gacagtgctgcctacccaggctccaaacctggctctgtgtacccaggatctttttacatg
caagagggcctacactcctcttcggacccctgggccccctctggatccataggccagtcg
ggatactctgctatgctggggaattcgccacacatcaatcagccaggctccttctccgca
ataaacccacaagacagaatgaactaccctttgcatggagcggacgtcaatggtttccat
tcgggctctacggcttatagccacacatcctccatgaatggatcagacagcattttggca
agcagaggttcagtcgcaagcagctcaggtgatgaaatcggaaaagctcttgcttcgatc
tatccttcggaccacaacagcaacaacttctcctccactccttccactcctgtgggctcc
cctcagggcattgcaacaggtgcagcacagtggtcgagagcttctggccagactgctctg
tctcctaactatgagggtggactacatgcactgcagaacaaaatggaagaccggctggag
gaggccattcacgtgctgcgaagtcatgcggtgggtcagcccccgggaattcctggagcc
catcctgacatgcacggcctactgggtgccgtctccacatccagtggatctatcgggggt
cttcctcagacctattccaacccaggactgcccctgagcaacagacaccctgccatggct
ggaagccatcatgacgaccatgcctgccttcctcccagcagcaccctgttgcagtccgct
catgcttcaggcaccccacagcctggaggagcaccagagggttttaacagtttgcccgga
ggcttggcccacgccacgcattcgtcaaacaagtccgacattaagagggaagacaaggaa
gatgatgagaactcctccgtggctgacaagtctgaggaagagaagaaggaaagcaaaccg
tctcgcaccaggacaagaaaggaggtgtttacccatcaggtcctttcaggtgtatcagac
cagggagaagatccagacaatgaagatgatgaggatttgccggcagaggtaaagatcgag
cgtgagaaagagcggcgagtggcaaacaatgcacgagagcgactgcgggtgcgtgacatc
aatgaggccttcaaagagctgggccgcatgtgccagctgcacctgagcaacgacaaaccc
cagaccaaactgctcatcctgcaccaagccgtcaacgtgatcctaaacctggagcaacaa
gtccgcgaacgcaacctgaaccccaaagcggcatgtctgaagcgacgtgaagaggagaaa
gtgtccggggtggttggagacagtcaaatgcagctgtccggaccacatccaggactggga
ggagatggacgcaactctgtcagtcacatgtga
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