Lonchura striata domestica (Bengalese finch): 110481231
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Entry
110481231 CDS
T05897
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr02010
ABC transporters
lsr04145
Phagosome
lsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110481231
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110481231
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110481231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsr02000
]
110481231
Enzymes [BR:
lsr01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
110481231
Transporters [BR:
lsr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
110481231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Motif
Other DBs
NCBI-GeneID:
110481231
NCBI-ProteinID:
XP_021405420
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MLSPPIRRLLALLGPERGRWTLVGGLMSASALGEVAAPYFTGRVTDRVAEEDAAAAVWPL
VLVGLGSAITELACDSMAAVALTRARDRLQRGAVAAVLRGDVPGPGGSLGDTPGAVAARV
TGDAEAAHSALGDVLVPGLWALTRAVSLLAVVAWLSPLLGLLTLLALPLFLLLPRAVGRI
QQDLARQVRAAQASTTAVALESLGAMGTVRAFGHEAGVTERVRQRLAQGHRLEQKEALAY
AAGLWASGFPALVLKLALLFLGGRLVAAGTVTRGELVTILMCQLHFTKAVEAMLLYVPIL
AKAIGSSETLLELLEQARTVTLEGPPSPVTPRGHETTWTRGLCLRDVWMSYPGRSEPVLK
GVSLSLRPGEVVAVLAPPGGGKSSLVAAALGLRPLAGGAVLLDGAPLTPHSDPALREQVA
GVLQCPSLLSRSLSANITLGWGHKEGTQVMAAARRVGVHDWAKQLLHGYDTEVGPRGMQL
SGGQAQGVALARALLRNPQVLVLDEPTRALDPMTRRQVEQELLCPGTGEGPAVLLVTGRV
ALAQRAPRVALLEGGRLRELGTPGELRTLPWGTAGDTEDGEGDD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctccccccatccgccggctcctggccctgctgggccccgagcgcgggcgctgg
acgctggtgggggggctgatgtcggcttctgctctcggtgaggtggctgccccctacttc
acgggccgtgtcaccgaccgggtggcggaggaggacgcagcagcggccgtgtggcccctt
gtgctggtggggctcggcagtgccatcaccgagctggcctgtgacagcatggcagctgtg
gcgctgacgcgggcgcgggaccggctccagcgcggcgcggtggccgcggtgctccgcggg
gacgtgcccgggccggggggcagcctgggggacacgccgggcgcggtggcggcgcgggtg
acaggggacgccgaggcggcgcactcggcgctgggcgatgtgctggtgccggggctgtgg
gcgttgacccgggctgtgtcgctgctggccgtggtggcctggctgtccccgctgctgggc
ctgctcaccctcctggcactgcccctcttcctgctgctgccacgcgccgtcgggcgcatc
caacaggacctggcccggcaggtgcgggcagcgcaggccagcaccacggcagtggccctg
gagtccctgggggccatggggaccgtccgggccttcgggcacgaggccggtgtcaccgag
cgtgtccggcagcgcctggcccagggacaccggctggagcagaaggaggcgctggcctac
gcggccgggctctgggccagtgggtttcctgcactggtcctgaagctggcactgctcttc
ttggggggacgcttggtggctgcagggactgtcactcgtggggagctggtcaccatcctc
atgtgccagctacacttcaccaaggctgtggaggccatgctcctgtacgtcccgatcctg
gccaaggccattggctcctctgagacactcctggaactgctggagcaggccaggacggtg
acactcgaagggccaccatcacctgttaccccgcggggccatgagaccacatggactcga
ggcctgtgcctcagggatgtctggatgtcatacccggggcggtccgagccagtcctcaag
ggggtgtcgctgtcgctgcgcccgggagaggtcgtggccgtgctggcgccccctggcggc
gggaagagctccctggtggcggccgcgctggggctgcgccccctggcgggcggggcggtg
ctgctggacggggcccccctgaccccgcactcggacccggctctgcgggagcaggtggct
ggtgtcctgcagtgcccgtccctgttgtctcgctccctcagcgccaacatcacgctgggc
tggggacacaaggaggggacacaggtgatggcagcggcgcggcgggtgggagtgcatgac
tgggccaaacagctgctgcatggctatgacacagaggtgggcccacgggggatgcagctt
tcagggggacaggcacaaggggtggcactggcccgggccctgctcaggaacccccaagtg
ctggtgctggatgagcccacgcgggcactcgaccccatgacccggcgccaggtggagcag
gagctgctgtgtcccgggacaggggaggggccggcggtgctgctggtgacaggacgggtg
gccctggcccagcgggcaccgagggtggccctgctggaggggggacggctgcgggagctg
gggacccccggggagctaaggaccctcccgtgggggacagcgggggacactgaggatggg
gagggggacgactag
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