Paramagnetospirillum magneticum: amb4456
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Entry
amb4456 CDS
T00305
Name
(GenBank) D-alanyl-D-alanine dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag01502
Vancomycin resistance
mag02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
amb4456
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
amb4456
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mag01002
]
amb4456
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mag01011
]
amb4456
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
mag01504
]
amb4456
Enzymes [BR:
mag01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
amb4456
Peptidases and inhibitors [BR:
mag01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
amb4456
Peptidoglycan biosynthesis and degradation proteins [BR:
mag01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
amb4456
Antimicrobial resistance genes [BR:
mag01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
amb4456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Motif
Other DBs
NCBI-ProteinID:
BAE53259
UniProt:
Q2VYR6
LinkDB
All DBs
Position
complement(4868679..4869308)
Genome browser
AA seq
209 aa
AA seq
DB search
MARTIISPLYFPGVGNESRKMHPLVPITAEEHGVEILLAYATADNFTGKPVYAPAAGCWL
HAEAAPLLRKAVALARPLGLSLRILDAFRPAEAQWALWNHTPDPEFLADPHRGSTHSRGV
AVDLDLLDTASGQALDMGTAFDAFTPLSHHAVTGVSVEAQRNRLLLLGLMNAAGWDFYAN
EWWHYQMHAAARFPLLSDTVLGAERMMRE
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaacgatcatctcgccgctatacttccccggcgttggaaatgaaagcaggaag
atgcaccccctggttcccatcaccgccgaagagcatggcgtcgagattcttctggcctat
gccacggccgacaatttcacgggaaagccggtctacgcccccgccgccggctgctggctg
catgccgaggcggcgccgctgctgcgaaaggcggtggcgttggcccggccgctgggcctg
agcctgcgcatcctcgacgccttccgtccggccgaggcgcaatgggcgctgtggaaccac
acccccgatcccgaattcctcgccgatccgcaccggggctccacccattcccgcggcgtg
gcggtggacctcgacctgctggacaccgccagcggtcaggccctggacatgggcaccgcc
ttcgacgccttcacgccgctctcccaccacgcggtgaccggggtcagcgtcgaggcccag
cgcaaccgcttgctcctgctgggcctgatgaacgccgccggctgggacttctatgccaac
gagtggtggcactatcaaatgcatgccgccgcccgctttcccctgctgtccgatacggtg
ctgggggcggagcggatgatgagggagtga
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