Mus caroli (Ryukyu mouse): 110294566
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Entry
110294566 CDS
T05910
Symbol
Usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110294566 (Usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110294566 (Usp42)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110294566 (Usp42)
Peptidases and inhibitors [BR:
mcal01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110294566 (Usp42)
Ubiquitin system [BR:
mcal04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110294566 (Usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
110294566
NCBI-ProteinID:
XP_021018545
Ensembl:
MGP_CAROLIEiJ_G0027985
UniProt:
A0A6P5PT30
LinkDB
All DBs
Position
5:complement(136430566..136456817)
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AA seq
1324 aa
AA seq
DB search
MTIVDKTEPSDPSTCQNQPGSSEAVSPEDMDTGSASWGAVSSISDVSNHTLSLGPVPGAV
VYSNSSVPEKSKPSPPKDQVLGDGIAPPQKVLFPSEKICLKWQQSHRVGAGLQNLGNTCF
ANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPGDVIKPMFVIN
EMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSR
VKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPAS
KRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLNQQAYVLFYIRSHDVKNGGEP
AHPAHSPGQSSPRPGVSQRAVNSKQAAPGFIGPQLPSHVMKNTPHLNGTTPVKDTPSSSV
SSPNGNTSVNRASPATASTSVQNWSVTRPSVIPDHPKKQKITISIHNKLPARQGQAPLNN
SLHGPCLEAPSKAAPSSTITNPSAIQSTSNVPTTSTSPSEACPKPMVNGKAKVGASVLVP
YGAESSEESDEESKGLAKENGVDMMAGTHSDRPEAAADEGAEASSHELQEPVLLNGANSA
DSDSRENSLAFDSASCQVQPELHTENLFSKLNGLPGKVTPAPLQCVPEDRILETFKLTNQ
AKGPAGEESWTTTGGSSPKDPVSQPEPISDEPSPLEIPEAVTNGSTQTPSTTSPLEPTIS
CTKEDSSVVVSAEPVGGLPSVSALCNSTGTTLGDTPVPESCDPGDLTANPSQPTQAVKGD
TAEKAQDSAMAEMVERLSPAPSVLAGDGCEQKLLLYLSAEGSEEAEDSSRSSAVSADMMP
PKPDRTTTSSCEGAAEQAAGDRGDGGHVGPKAQEPSPAKEKMSSLRKVDRGHYRSRRERS
SSGEHARDSRPRPEDHHHKKRHCYSRERPKQDRHPTNTYCNGGQHLGHGDRASPERRSLS
RYSHHHSRIRSGLEQDWSRYHHLENEHAWVRERFYQDKLRWDKCRYYHDRYTPLYTARDA
REWRPLHGREHERLVQSGRPYKDSYWGRKGWELQSRGKERPHFNSPREAPSLAVPLERHL
QEKAALSVQDSSHSLPERFHEHESVKSRKRRYETLENHDGRLEKKVHKSLEKDALEEPRV
KKHKKSKKKKKSKDKHRDRESRHQQESDFSGAYSDADLHRHRKKKKKKKRHSRKSEDFIK
GVEMRLPKLSSYEAGGHFRRTEGSFLLADGLPVEDSGPFREKTKHLRMESRPDRCRLSEY
GQGD
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaaactgaaccttcagacccatcaacctgtcagaaccagcctggc
agttctgaggcagtctcacctgaagacatggacacaggctctgccagctggggtgctgtg
tcttcaataagtgatgtctcaaatcatacactttcattagggccagtgcctggtgctgtg
gtttattctaattcgtctgtacctgaaaaatcaaaaccatcaccaccaaaggatcaagtc
ctaggtgatggcattgctcctcctcaaaaggtcctgtttccatctgaaaagatttgtctt
aagtggcagcaaagtcatcgagttggcgctgggctccagaatttgggcaacacctgtttt
gccaatgccgcattgcaatgtctgacttacacgccacccctcgccaattacatgttatcc
catgaacactccaagacatgccacgcagaaggattttgtatgatgtgcacaatgcagaca
cacattacccaggcacttagcaaccctggggatgttatcaagccgatgttcgtcatcaat
gaaatgcggcgtatagctagacacttccgttttggaaaccaagaagatgcccatgagttt
cttcagtacacagtcgatgccatgcagaaagcatgtttaaatggcagcaataaattagac
agacacacccaggccaccaccctggtctgccagatattcggaggctacctaagatcccga
gttaaatgtttaaattgcaagggtgtttcagatacctttgatccctatctggacataaca
ttggagattaaggctgcacagagtgttaccaaggcgttagagcagtttgtgaagccagaa
caactggatggagagaactcctacaaatgcagcaagtgcaaaaaaatggttccagcttca
aagagattcacaatccataggtcctctaatgttcttaccatctcactgaagcgcttcgcc
aacttcaccggtggaaagattgctaaggatgtgaaatatcctgagtaccttgatattcgg
ccctatatgtctcagcccaatggagagccaattatttatgttttgtatgctgtgctggta
cacactggttttaactgtcatgctggccactatttttgctacatcaaggctagcaatggc
ctctggtatcagatgaatgactccatcgtgtccaccagtgatatcagagcagtgcttaac
cagcaagcttacgtcctcttttatatcaggtcccatgatgtgaaaaatggaggggagccc
gctcatcctgcccacagccccggccagtcctctccccgcccaggagtcagtcagcgggca
gtcaacagcaagcaggcggccccagggtttattggaccccagctgccttcccacgtgatg
aagaacacgccacacttgaatggcaccacgccagtgaaagacacgccaagtagttctgtg
tcaagccctaacggaaacaccagcgtcaatagggccagtcctgctactgcttcgacttct
gtgcagaactggtctgttaccagaccctcagttattccagatcaccccaagaaacaaaaa
atcaccatcagtattcacaacaagttgcctgctcgccagggtcaggcaccactgaataac
agcctccatggcccttgtctggaggctcctagtaaggcggcaccctcctccaccatcact
aacccttctgcaatacagtctacctcgaacgtacccacaacgtcgacttcccccagtgag
gcctgtcccaagcccatggtaaatggcaaggctaaagtgggcgccagtgtgctcgtcccc
tatggggccgagtcctcagaagagtctgatgaggagtcgaaaggcctggccaaggagaac
ggtgtggacatgatggccggcactcactccgataggccagaagctgctgcagatgagggt
gctgaggcttcctcccatgagcttcaagaacccgtcctgctaaatggtgctaatagcgca
gacagtgactcacgagagaacagcctggcatttgacagtgccagctgccaggtccagccc
gagctacacacagaaaacctcttttccaaacttaatggtcttcctggaaaggtgacgcct
gctcctttgcagtgtgttcctgaagacagaatccttgagaccttcaagcttaccaaccag
gcaaagggtccagcgggtgaagagagttggactacgacagggggaagctctccaaaggac
cctgtttcacagccagagcccatcagtgatgagcccagtccccttgagataccggaggct
gtcaccaatgggagcacacagaccccttccaccacatcacccctggagcccaccatcagc
tgtaccaaagaagactcgtccgttgttgtctcagctgaacctgtggggggtttgccttcc
gtctctgctctttgtaacagcaccggtactaccttgggggataccccagtgcccgaatcg
tgtgaccctggagacttgactgccaacccgagccagccaacccaagcagtgaaaggcgat
acagctgagaaggctcaggactctgccatggctgaaatggtggagaggctgagccctgct
ccctcagtactcgcaggtgacgggtgtgagcagaaactcttactttacctcagcgcggag
ggctcagaggaagcagaagactcttccagaagctcggcggtctctgctgacatgatgccc
cctaagcctgacaggaccaccaccagctcctgtgaaggggctgccgagcaggctgctggg
gacagaggcgatggaggccatgtgggacccaaagctcaggagccttccccagccaaggaa
aagatgagcagcctccggaaggtggaccgaggacactatcggagtcggagagagcgctcc
tccagtggggagcacgcgagggacagcaggccccggccggaggaccatcaccataagaag
cggcactgctacagccgagagcggcccaagcaggaccgccatcctactaatacatactgc
aatggtggccagcacttgggccacggggacagagccagccctgagcgccgctccctgagc
aggtatagccaccaccactcacggattaggagtggcctggagcaggactggagccggtac
caccatttggaaaacgagcatgcttgggtcagggagagattctaccaggacaagctgcgg
tgggacaagtgcaggtattaccatgacaggtacacacccctgtacacggcccgggacgcc
cgcgaatggcggcctctgcatggccgtgagcatgaacgccttgtccagtctggacggcca
tacaaggacagctactggggccgcaagggctgggagctgcaatcccgggggaaggaacgg
cctcacttcaacagcccccgagaggcccctagccttgctgtgcccctcgagagacatctc
caagagaaggctgcactgagtgtgcaggacagcagccacagtctccctgagcgctttcat
gaacacgaaagtgtcaagtcgaggaagcggaggtatgagactctagaaaatcatgatggc
cgtctagaaaagaaagtccacaaaagcctggagaaggacgcgctagaggagccaagggtg
aagaagcacaaaaagtctaaaaagaaaaagaagtccaaagataaacaccgggatcgagaa
agcaggcaccagcaggaatctgatttttcaggagcgtactctgatgctgacctccataga
caccggaagaaaaagaagaaaaagaaaaggcattccaggaagtcggaggactttataaag
ggtgttgagatgcgtttaccgaagctctccagctatgaggccggcggccatttccggaga
acagagggcagctttctcctggctgatggtctgcctgtggaagacagtggccctttccgg
gagaaaacgaagcatttaaggatggaaagccggcctgacagatgccgtctgtcggagtat
ggccagggtgactaa
DBGET
integrated database retrieval system
