Mus caroli (Ryukyu mouse): 110295293
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Entry
110295293 CDS
T05910
Symbol
Lnx1
Name
(RefSeq) E3 ubiquitin-protein ligase LNX isoform X1
KO
K10692
ligand of Numb protein X 1/2 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110295293 (Lnx1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110295293 (Lnx1)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
110295293 (Lnx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110295293
NCBI-ProteinID:
XP_021019456
Ensembl:
MGP_CAROLIEiJ_G0027305
UniProt:
A0A6P7R903
LinkDB
All DBs
Position
5:complement(67518919..67627199)
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AA seq
728 aa
AA seq
DB search
MNQPDLADDPDPSPEPLCVVCGQNHSPEENHFYTYTEDVDDDLICHICLQALLDPLDTPC
GHTYCTLCLTNFLVEKDFCPVDRKPVVLQHCKKSSILVNKLLNKLLVTCPFTEHCTEVLQ
RCDLQHHFQTSCKGASHYGLTKDRKRRSQDGCPDGCASLMATTLSPEVSAAATISLMTDE
PGLDNPAYVSSVEDGEPVANSSDSGRSNRTRARPFERSTMRSRSFKKINRALSALRRTKS
GSVVANHADQGRDNSENTTVPEVFPRLFHLIPDGEITSIKIIRADPSESLSIRLVGGSET
PLVHIIIQHIYRDGVIARDGRLLPGDIILKVNGMDISNVPHNYAVRLLRQPCRVLRLTVL
REQKFRSRSNAHAPEYFRPLDDSVHVILNKSSPEEQLGIKLVRRVDEPGVFIFNVLNGGV
ADRHGQLEENDRVLAINGHDLRFGSPESAAHLIQASERRVHLVVSRQVRQSSPDIFQEAG
WISNGQQSPGPGERNTASKPATTCHEKVVSVRKDPSESLGMTVGGGASHREWDLPIYVIS
VEPGGVISRDGRIKTGDILLNVNGIELTEVSRTEAVAILKSTPSSVVLKVLEVKEQEAQE
DCSPAALDSNHNVTPPGDWSPSWVMWLELPQYLYNCKDVILRRNTAGSLGFCIVGGYEEY
SGNKPFFIKSIVEGTPAYNDGRIRCGDILLAVNGRSTSGMIHACLARMLKELKGRITLTI
ASWPGTFL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaccggaccttgcagatgacccagatcccagtcccgagccgctgtgcgtagtg
tgtggccaaaaccactccccagaggaaaaccacttctacacgtatacagaggatgtagat
gacgacctcatatgccacatctgcctacaagcattgctggaccctctggacactccatgt
ggacacacctactgcaccctgtgcctcaccaacttcctggtggagaaggacttctgtcct
gtggatcgaaagcctgtggttctgcagcactgcaagaaatccagcatcttggtcaacaag
cttctcaataagctgttggtcacctgcccgttcaccgagcactgcaccgaggtgctacag
cgctgtgatctccagcatcatttccagacaagctgcaaaggggcctcccactacggcctg
accaaggacaggaaaaggcgctctcaagatggctgtcctgatggttgcgccagcctcatg
gcaacgacactctccccagaggtttctgcagccgccaccatctctttaatgacagatgag
cctggcctagacaaccctgcctacgtgtcctcggtggaggatggtgagccagtagccaac
tcctcagactctggccggagcaaccggactagggcacgtccctttgagcgctccactatg
agaagccggtctttcaagaagatcaaccgagctctaagtgctctccggaggacgaagagc
gggagtgtcgttgccaaccacgctgaccagggcagggacaactctgagaacaccactgtc
cctgaagtcttcccaaggttgtttcacctgattccagatggtgaaattacaagcatcaaa
atcatcagagcagatcccagtgaaagcctctccataaggctggtggggggcagcgagacg
ccactggtccacatcatcatccagcatatttatcgcgatggagtgattgccagagatgga
cgactgctgccaggagacatcattctcaaggtcaacggcatggacatcagcaatgtccct
cataactatgccgtgcggctcctgcggcagccctgccgggtgctgcggctaacggtgctg
cgggagcagaagttccgtagcagaagcaatgcgcacgcgccggagtacttcagacctctg
gatgacagcgtccatgtaatcctcaacaaaagcagccccgaggagcagcttggcataaag
ctggtgcgccgggtggatgaacccggcgtgttcatcttcaacgtgctaaatggaggtgtc
gctgaccgacacggccagctggaggagaatgaccgtgtgctggccatcaacgggcatgac
cttcgattcggcagtccagagagtgcagctcatctgattcaggccagtgaaagacgcgtc
catctcgtcgtgtcccgccaggttcgacagtccagcccagacatctttcaagaagctggc
tggatcagcaatggccagcagtctccaggcccaggagagaggaacacagcttctaagcct
gcaaccacctgtcatgagaaggttgtaagtgtccggaaagaccccagcgaatctctcggc
atgaccgtcggagggggagcatcccacagggaatgggacttgcccatctatgtcatcagt
gtcgaacccggtggagtcataagcagagacgggagaataaaaacaggtgacattttattg
aatgtgaatgggattgagctcacagaggtcagccggacagaggccgttgccatactgaag
agcacaccctcctcagtggtactcaaagtcttggaagtcaaggaacaggaggcccaggaa
gactgcagcccagcagccctggactccaaccacaacgtgaccccgcctggtgactggtcc
ccatcctgggtcatgtggctggaattaccacagtacttatataactgtaaagatgtgata
ctacgaaggaacacagctggaagcctgggcttctgcattgtgggaggttatgaagaatac
agtgggaacaaacctttttttatcaagtccattgtcgaaggaacacctgcatacaatgat
ggaagaatcagatgtggtgacattcttctcgctgtcaacggtagaagtacatcgggtatg
atacacgcttgcttggccaggatgctcaaggaacttaaagggagaattactctgaccatt
gcttcttggcctggtacttttttataa
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integrated database retrieval system
