Mus caroli (Ryukyu mouse): 110295713
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Entry
110295713 CDS
T05910
Symbol
Xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
110295713 (Xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110295713 (Xpc)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
110295713 (Xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
110295713
NCBI-ProteinID:
XP_029334095
Ensembl:
MGP_CAROLIEiJ_G0028655
UniProt:
A0A6P7RAY3
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Position
6:complement(87525087..87546180)
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AA seq
797 aa
AA seq
DB search
MGENSATSPSDLPVKAVEIEIETPQQAKERERSEKIKMEFETYLRRMMKRFNKEVHENMH
KVHLLCLLASGFYRNSICRQPDLLAIGLSIIPIRFTKVPLQDRDAYYLSNLVKWFIGTFT
VNADLSAXEQDGLQTTLERRIAIYSARDNEELVHIFLLILRALQLLTRLVLSLQPIPLKS
TVSKGRKXSKETSVEGPGGSSELSSNSPESHNKPTTSRRIKQEETLSEGRGKATARGKRG
TGTAGSRQRRKPSCSEGEEAEQEVQGRPHARKRRVTAKVSYKEESESDGAGSGSDFELSS
GEGQRSSDEDCEPGPRKQKRASAPQRTKAGSKSASKTQRGSQCEPSSFPEASSSSSGCKR
GKKVSSGAEEMADRKPAGVDQWLEVYCEPQAKWVCVDCVHGVVGQPVACYKYATKPMTYV
VGIDSDGWVRDVTQRYDPAWMTTTRKCRVDAEWWAETLRPYRSLLTEREKKEDQEFQAKH
LDQPLPTSISTYKNHPLYALKRHLLKFQAIYPETAAVLGYCRGEAVYSRCMKHPPCLPGG
LVPYSRTIVVEQEAFLITRPFPLEQMVKGFSNRARKARLSEPQLHDHNDXGLYGHWQTEE
YQPPIAVDGKVPRNEFGNVYLFLPSMMPVGCVQMNLPNLHRVARKLGIDCVQAITGFDFH
GGYCHPVTDGYIVCEEFRDVLLAAWENEQAIIEKKEKEKKEKRALGNWKLLVRGLLIRER
LKLRYGAKSEAXXPHAAGGGLSSDEEEGTSSQAEAARVLAASWPQNREDPEQKPEYTKMT
RKRRAAEASHLFPFEKL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaattctgccacctcaccgtctgacctgcctgtgaaggcggtggagattgaa
attgaaacaccacagcaggcgaaggaacgggaaagaagtgagaagataaagatggagttt
gagacatacctgcggaggatgatgaagcgtttcaataaagaagtacacgagaacatgcac
aaggttcacctgctatgcctgctggccagtggcttctatcgaaatagcatctgccgacag
ccagatctgctggccattggcctctccatcattccaattcgctttaccaaggtgccactt
caagatagggatgcctactacctttcaaacctggtaaagtggttcatcggaaccttcact
gtcaacgctgacctttcagccancgagcaggacggcctgcagaccaccttggaaaggagg
attgccatttactcagcgagggataatgaagagttggtccatatatttcttctgattctt
cgggctctgcagctgctcacccggctggtcttgtctctgcagcccattccactgaagtca
actgtgtcgaaggggaggaagncttccaaggagacatctgtagagggtcctggaggttct
tcagaactctctagcaacagtccagaaagccacaacaaacccacgaccagcaggagaatc
aaacaagaagaaaccttgtctgagggcagaggcaaggcaaccgccagggggaagagaggc
acgggcactgcgggtagcaggcagcggaggaagccttcctgcagtgagggagaggaggcc
gagcaggaagtccagggccgtccacatgcccggaagcggcgtgtgacngccaaggtgtca
tacaaagaggagagtgagagcgatggggcaggcagcggctctgactttgaactgtccagt
ggggagggccaacgttcctctgatgaggattgtgagcctggccctcgcaagcagaagagg
gcctcagctcctcagaggacaaaggctgggtctaagagtgcttccaagacccaacgcgga
agccagtgtgagccatcaagctttccagaggcatcttcaagctcttcaggctgtaagaga
ggcaagaaggtttccagtggtgctgaagagatggcagataggaaacctgctggtgtagac
cagtggctggaggtgtactgtgagccacaggcaaagtgggtgtgtgtggactgtgtgcac
ggtgtggtgggccagcctgtggcctgttacaaatatgccaccaaacccatgacctatgtt
gtaggcattgacagtgatggctgggtccgagatgtcactcagaggtatgacccagcctgg
atgaccacaacccgcaagtgccgggttgacgctgagtggtgggctgagaccttgagaccc
tatcgaagcctacttacggagagggagaagaaggaagaccaggagtttcaggcaaagcac
ctggatcagcctttgcccacctccatcagcacatacaagaaccaccctctgtatgccctg
aagcgccacctcttgaaattccaggctatctaccctgagacagctgcggtgcttggatat
tgtcgtggagaagcagtctattccaggtgcatgaagcatcctccttgtcttcctggtggt
ctggtgccttacagtagaacaattgtcgtcgagcaggaagcatttcttataaccaggccg
tttcctctggagcagatggtgaaaggcttctctaaccgtgcccggaaagcccggctctcg
gagccccagctgcatgaccacaacgacttnggcctctatggtcactggcagacggaagag
tatcagcctcctatagctgtcgatgggaaggtgcctcggaatgagtttgggaacgtgtac
ctcttcctgcccagcatgatgcccgtcggctgtgtccagatgaacctgcctaacctgcac
cgggtggcgcgcaagctgggcatcgactgtgtgcaggccatcactggcttcgatttccat
ggaggctattgccatccagtaactgatggctacattgtctgtgaggaattcagagacgtg
ctgctggctgcttgggagaatgaacaggccatcattgaaaagaaggagaaggagaaaaag
gaaaagcgggcgctggggaactggaagctgctggtcagaggactgctcatcagagagagg
ctgaaactgcgctatggggccaagagcgaggcagnngntccccatgctgctggaggagga
ctctcttctgatgaagaggaagggaccagttcacaagcagaagcagccagagtcctggct
gcctcctggccacagaacagagaggatccagaacagaagcccgagtacactaagatgact
cggaagaggcgggcggcagaggcttcccacctctttccgtttgagaagctgtga
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