Mus caroli (Ryukyu mouse): 110305472
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Entry
110305472 CDS
T05910
Symbol
Supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110305472 (Supt6h)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110305472 (Supt6h)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110305472 (Supt6h)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110305472 (Supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
HHH_3
S1
Tex_N
HHH_9
SH2
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
110305472
NCBI-ProteinID:
XP_021033123
Ensembl:
MGP_CAROLIEiJ_G0016796
UniProt:
A0A6P5QVP2
LinkDB
All DBs
Position
11:complement(73140578..73180175)
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNHEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDERGNLKDFIND
DDDEEEGEEDEGSDSGDSEDDVGHKKRKRPSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDDEDDEEEYGKEEHEKEAIAEEIFQDEEGEERQEAVEAPMAPPDEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEDY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKAAEDDELEEEADWIYRNAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKIGLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
VNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSAGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSNRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSTQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagtgaggccgaagagtcagaagaagaatacaatcatgaaggc
gaggtggtacctcgagtcaccaagaagtttgtggaagaggaggatgatgatgaggaggag
gaagaggagaatctagatgatcaagatgagcgaggcaacctgaaagactttatcaatgat
gatgatgatgaagaggaaggggaggaggatgagggcagcgactctggggattcagaagac
gatgttggccacaagaagagaaaacgcccatcttttgatgaccgcctggaagatgatgat
tttgacctcattgaggagaatttgggtgttaaagtcaaacgaggacaaaaataccgacgt
gtcaaaaaaatgtctgatgatgatgaagatgatgaagaggaatatggcaaagaggaacac
gagaaggaagccattgcagaggaaatcttccaagatgaagaaggggaagaacgccaggag
gctgtagaggcccccatggcccctccagacgaagaggaggaagatgatgaggagtcagat
attgacgatttcattgtggatgatgatggacagcctctgaaaaaacccaaatggcgaaaa
aagctccctggatatacagatgcagccctgcaggaagcccaggagatcttcggtgtggac
tttgactatgatgaatttgagaaatacaatgaatacgatgaagaactggaagaagactat
gagtacgaggatgatgaggctgaaggtgagatccgagtgcgccccaagaagaccaccaag
aaacgagtgagtcgcaggagcatctttgagatgtacgagcccagtgagctggagagcagc
cacctcacagaccaggacaatgaaatccgagccactgacttgcctgagaggttccagctt
cgctccatcccagtcaaggcagctgaagatgacgagctagaagaggaagctgactggatc
tatagaaatgccttcgcaacaccgaccatctccctccaggacagctgtgattacctagac
cgtgggcagccaactagtagcttcagtcgaaaagggcccagcacagttcagaagatcaaa
gaggccctgggcttcatgcggaatcagcattttgaggtgcctttcattgccttctaccga
aaggagtatgtggaacctgagctgcacatcaatgacctgtggagggtgtggcagtgggat
gagaagtggactcagctgagaatccgcaaagagaacctaacacggctgtttgagaagatg
caggcttatcagtatgaacaaatctctgctgaccctgacaaacctcttgctgatggcatc
cgggctctagatactactgacatggagaggctcaaagatgttcagtcaatggatgaactg
aaagacgtctacaaccatttcttactttactacggccgtgacatccccaagatgcagaat
gctgccaaggctagccggaagaagctgaaacgcataaaggaggatggcgacgaagaaggt
gaaggtgaggaggctgaagatgaggaacagaggggaccagagctcaagcaagcctcccgc
cgagacatgtataccatctgccagagtgccgggctagatggcctggccaaaaagtttggc
ctcacacctgagcagtttggggagaacctccgtgacagctaccaacgccacgagacagag
cagttccccgcagagcctttggagctggccaaagattacgtgtgcagccagttccctaca
ccagaagctgtgcttgaaggtgcccgatacatggttgcactacagattgccagggagccc
cttgtcagacaggtgctgagacaaacctttcaggagagagccaagctaaacataacccca
accaagaaaggtagaaaggatgtggatgaggcccactacgcttactcttttaagtactta
aagaacaagcctgttaaagagctgagagatgaccagttcctcaagataggcctggctgag
gatgaagggctgctcaccattgacatcagcatagatatgaagggagtggaagggtatggt
aatgaccagacgtattttgaggagatcaagcagttttactaccgggatgagttcagccac
caagtacaggaatggaaccggcagcgcactatggccatcgagcgagctctgcagcagttc
ctctacgtgcaaatggccaaggaacttaagaacaagctgctagctgaggccagggagagt
gttgtgaaggcctgtagccgaaagctctacaactggttgagagtggcaccctaccgacca
gatcagcaggtagaggaggacgacgactttatggatgagaaccaggggaagggcatccga
gtcctaggcattgctttctcctctgccagagatcaccctgtgttctgtgccctagtcaat
ggtgaaggagaagtgactgatttcctccgcctgccccattttaccaaacggcgaactgca
tggagagaagaggagcgggaaaagaaggctcaagatattgaaaccctaaagaagtttctt
gtgaataagaagcctcatgtggtcactgtcgcaggagagaacagggatgcccagatgttg
attgaggatgtgaagcggatagtgcatgaactggaccaaggccaacagctgtcttctatt
ggggtggagctggttgacaatgagctggccattctgtacatgaacagcaagaaatcagag
gcagagttccgggattatccaccagttttgagacaagctgtctctctagcccggcgtatc
caagaccctctgatagaatttgcccaggtgtgcagctcagatgaagacatcctatgtctc
aagtttcatcccttgcaggagcatgttgtgaaagaggagctgctcaacgccttgtactgt
gaattcatcaatcgggtcaatgaagtcggggtcgatgtcaaccgtgccattgcccatcct
tacagccaggccttgatccagtatgtctgtggtctgggaccccgaaaagggacccacctg
ctgaagattttgaaacagaacaacactcgactcgagagccggactcagctggtcaccatg
tgtcatatgggtcccaaagtcttcatgaattgtgctggcttcctcaagatcgacactgct
tctctgggggacagcactgactcatacattgaagttcttgatggctctcgagtccaccct
gaaacgtatgagtgggccagaaagatggcagtggatgccttagaatacgatgagtctgca
gaagatgctaatcctgctggagcccttgaggaaatcttggaaaacccagagcgactgaag
gatttagatcttgatgcctttgcagaagaactagaaagacagggctatggtgacaagcac
atcacactctatgacatccgagcagagctcagttgtaggtataaggacctccggacagcc
taccgctctcctaacacagaggagatcttcaatatgttaaccaaagagacgccagagacc
ttctacattggaaagcttatcatctgtaatgttaccggcattgctcacaggcgcccacag
ggtgagagctatgaccaggccatccgaaatgatgagacagggctgtggcagtgccccttc
tgtcaacaggacaacttccctgagctaagcgaggtctggaaccattttgacagtggatca
tgccctggtcaggccattggcgtgaaaacacggctagacaatggcgtcaccggcttcatc
cctaccaaattcctcagtgacaaggtggtgaagaggccagaggagcgagtgaaggtgggg
atgactgttcactgccggatcatgaagatcgatattgaaaagttcagtgcagacctgacc
tgccggacctcagacctcatggacaggaacaatgagtggaaactgcccaaggacacctac
tacgactttgatgcagaagctgcagaccacaagcaggaagaggatatgaaacgaaagcag
cagcggaccacatacatcaagcgagtgattgcacacccgtccttccataacataaatttc
aagcaagcagaaaagatgatggagaccatggaccaaggggatgttatcattcggcccagc
agtaagggtgaaaaccacctgacggtgacctggaaagttagtgccggcatctaccagcac
gtggacgtgcgggaggagggcaaggagaacgccttcagcctgggagccactctgtggatc
aacagtgaggaatttgaagacttggatgagattgttgcccgctatgtccagcccatggct
tcctttgctcgagaccttctgaaccacaaatattaccaggactgtagtggtggggaccga
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttac
ttcatctgtgcctgcaaggaactgcccggcaagttcctcctgggataccagccccggggt
aaacccaggatagaatatgtaacagtgactcctgaaggattccggtaccggggccagatt
ttcccaactgtgaatggactcttcaggtggtttaaggatcattatcaggatcctgtgcca
ggcatcactcccagtagcagcaacagaacacggacccccgcttctatcaatgctacccca
gccaacatcaatcttgcagatctgacacgggctgtgaatgccttgcctcagaacatgact
tcacagatgttcagtgccattgctgctgtgacaggccaagggcagaaccccaatgctacc
ccagcccagtgggcatccagccagtatggctacggtggcagcggaggaggcagcagcgcc
taccatgtgttcccaacaccagcccagcagccagtggccacaccactaatgacaccaagc
tactcctatacaaccccgagccagcccattaccaccccacaataccaccaactccaggcc
agcaccaccccacagtctacacaggcccagccccagccttcctccagctcccgacaacgg
cagcagcagccaaagtccaacagccacgcagctatcgactggggcaagatggccgagcag
tggctacaggaaaaggaggcagaacgacggaaacagaaacagcggctgaccccacgaccc
tctcccagccccatgatcgagagcacccccatgtccattgctggcgatgcgaccccactc
ctggacgagatggatcggtag
DBGET
integrated database retrieval system
