Mus caroli (Ryukyu mouse): 110307844
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Entry
110307844 CDS
T05910
Symbol
Sptlc1
Name
(RefSeq) serine palmitoyltransferase 1 isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00600
Sphingolipid metabolism
mcal01100
Metabolic pathways
mcal04071
Sphingolipid signaling pathway
Module
mcal_M00094
Ceramide biosynthesis
mcal_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
110307844 (Sptlc1)
09130 Environmental Information Processing
09132 Signal transduction
04071 Sphingolipid signaling pathway
110307844 (Sptlc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mcal01007
]
110307844 (Sptlc1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
110307844 (Sptlc1)
Amino acid related enzymes [BR:
mcal01007
]
Aminotransferase (transaminase)
Class II
110307844 (Sptlc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
110307844
NCBI-ProteinID:
XP_021035743
Ensembl:
MGP_CAROLIEiJ_G0018527
UniProt:
A0A6P5QP38
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Position
13:complement(48542132..48586820)
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AA seq
473 aa
AA seq
DB search
MATVAEQWVLVEMVQALYEAPAYHLILEGILILWIIRLVFSKTYKLQERSDLTAKEKEEL
IEEWQPEPLVPPVSKNHPALNYNIVSGPPTHNIVVNGKECVNFASFNFLGLLANPRVKAA
AFSSLKKYGVGTCGPRGFYGTFDVHLDLEERLAKFMKTEEAIIYSYGFSTIASAIPAYSK
RGDIIFVDSAACFAIQKGLQASRSDIKLFKHNDVADLERLLKEQENEDQKNPRKARVTRR
FIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHYGISIDDI
DLISANMENALASVGGFCCGRSFVVDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENP
DIFAVLKKKCQNIHKSLQGVSGLKVVGESLSPALHLQLEESRGSREKDVKLLQAIVDQCM
EKGIALTQARYLDKEEKCLPPPSIRVVVTVEQTEEELQRAASTIREAAQAVLL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtggcggagcagtgggtgctggtggagatggtgcaggcgctgtacgaggct
ccagcataccatcttattttggaaggaatcctgatactttggataatcagactcgttttc
tctaaaacttacaagttgcaggagcgttctgatcttacagccaaggagaaggaagaactg
attgaagagtggcagccagagcccctcgtccctccagtctccaagaaccaccctgctctc
aactacaacatcgtgtctggccctccaacccacaacatcgtggtgaatggaaaagagtgt
gtcaactttgcctcctttaacttccttgggctgctggccaaccctcgagttaaggccgca
gctttttcatctttaaagaagtacggagtgggtacctgtggtcctcgagggttctatggc
acatttgatgtccacctggatttagaagagcgcctggcaaagtttatgaagaccgaagaa
gccatcatttactcgtacggcttctctaccatagccagtgccattcctgcgtactctaag
agaggggacatcatctttgtggacagtgcggcctgctttgctatccagaaaggattacag
gcatcaagaagtgacattaagttatttaagcataatgatgtggctgacctggagcgactg
ctaaaagaacaagagaatgaagatcaaaagaatcctcgcaaggcccgtgtgactcgacgg
ttcatcgtggtggagggcttgtacatgaacactggaaccatctgtcctcttccagaactg
gttaaattaaaatataaatataaagcaagaatcttcctggaggaaagcctgtcgtttgga
gtccttggggagcacgggcgaggagtcaccgagcactatgggatcagtattgatgatatc
gaccttatcagtgctaacatggagaatgcactcgcttctgtcgggggcttctgctgtggc
cgctccttcgtggttgaccatcagcggctctctggtcaaggatactgcttttctgcttcg
ttacctcccctgctagctgctgctgccattgaggccctcaacatcatggaagagaatcca
gatatttttgcagttttaaagaaaaaatgccagaacatccataagtctctacaaggtgtt
tcgggtttaaaagtggtgggagagtccctttctccggcgcttcatctccagctggaagag
agcaggggctctcgggagaaagatgtgaagctgcttcaagcaatcgtcgatcagtgcatg
gagaagggcatcgcactgactcaggcccggtacttggacaaggaagagaagtgccttcct
cctccaagcatcagggttgtggtcaccgtggagcagacggaggaagagctacagagggct
gcatccaccatcagggaggcggcccaagctgtgctgttgtag
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