Mus caroli (Ryukyu mouse): 110309132
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Entry
110309132 CDS
T05910
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X2
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04015
Rap1 signaling pathway
mcal04510
Focal adhesion
mcal04722
Neurotrophin signaling pathway
mcal04910
Insulin signaling pathway
mcal05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
110309132 (Rapgef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110309132 (Rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
110309132 (Rapgef1)
09156 Nervous system
04722 Neurotrophin signaling pathway
110309132 (Rapgef1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
110309132 (Rapgef1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
110309132
NCBI-ProteinID:
XP_021037225
Ensembl:
MGP_CAROLIEiJ_G0023367
UniProt:
A0A6P5QYZ4
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All DBs
Position
2:25483127..25602101
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AA seq
1223 aa
AA seq
DB search
MSSGLGLRRSPEMSGKIEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSKIP
EKPVSKEARDRFLPEGYPIPLDLEQQAVEFMSTSAVASRSQRQKNLCWLEEKEKEVVSAL
RYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRIQHSSALSSCYSRVYQSLAN
LIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPSSP
ASKPDGQPELPLTDREMEILNKTSVSPSAELLPDSTSEEVAPPKPPLPGIRVVDNSPPAL
PPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVECYTQRRLSGGSRSCGGESP
RLSPCSSTGKLSRSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQTPPQ
AACSLSPLPESLGESGPPFLGHPFQLPLGSCLQQEGQQTDTPPALPEKKRRSAVSQTTDS
SGCRVSYERHPSQYDNISEGDLQNPVPVQPVPYPPFAAVLPFQQGASSASAEFVGDFSVP
ELAGDTEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQSEHIYQQKNKMLMEVYG
FSDSFCGSDSTQELAPPPALPPKQRQLQASYAASSFSVSYCVQQTKVAFTPEDGSAAQGL
SVSVSNSFLNRHGSLPVPSYKSVFRSYSQDFMPHHQASVQPFLPPTSSSSPHFPPVHTSQ
SSDLAVPTVSSPPPSTVDGPLSSSQDSSFHGNPVRLPSETSFTDSEPPSGKDGHPRDPSV
SSASGKDSRENGERSPKSLDGLESAQSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRG
GSGDILLVHATETDRKDLVLYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRV
SKNTFFVLVRVVDELCLVELTEEILKLLMELVFRLVCSGELSLARVLRKNILDKVDQKKL
LRCAHSDQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEE
KSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILS
ALDSAPIRRLEWQRQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTF
VHLGNPDYIDGKVNFSKRWQQFNILDSMRCFQQAHYEIRRNDDIINFFNDFSDHLAEEAL
WELSLKIKPRNITRRKTDREEKT
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcggcctcggcctccggcgcagcccggaaatgtccggcaagatcgagaaagca
gactctcagcgttctcatctctcctccttcaccatgaagctgatggacaaattccactct
cccaaaatcaagagaacaccatccaagaagggaaagccagccgaggtgtcgaagattcct
gagaagcctgtgagcaaagaggcaagagacagatttctaccagagggctaccctatcccc
ttggatctggagcagcaggcagtagaatttatgtccaccagtgctgtggcttccaggtct
cagaggcagaagaacctgtgctggctggaggagaaagagaaggaggttgtcagtgccttg
cgctactttaagaccattgtggacaaaatggccattgataagaaggttctggagatgctc
ccggggtcggccagcaaggtgctggaggccatcttacccctggtgcagactgaccctcgg
atccagcacagctcagccctctcctcctgttatagccgagtataccagagcctcgccaac
cttatccgatggtctgaccaggtgatgctagagggcgtgaactcagaagataaggagatg
gtgacaactgtgaagggcgttatcaaagctgtcctggacggagtgaaggagctagtgagg
ctaaccattgagaagcaggggcggccatcgccaacaagcccagtgaagcccagttcccca
gccagcaagcctgatggccagcctgagctccctctgacagaccgagaaatggagattctg
aataagacaagtgtgtcaccatctgctgaactgctcccagactccaccagtgaagaggtt
gcaccccccaagccccctttacctggcatccgggtggttgataacagtccaccagcatta
ccacccaagaaaaggcagtctgctccatcccccacccgggtggctgtggtagccccaatg
agtcgggctaccagtggctccagtttgcctgttggaatcaataggcaggactttgatgtt
gaatgttacacccagaggcgcctgtcaggaggcagccgctcctgcggtggtgagtctcct
cgcctgtccccctgcagcagcacgggcaagctcagccgctcagacgagcagctgtcctcc
ctggacagggatagtgggcagtgctcacggaacacaagctgtgaaacgctagatcactac
gaccccgactatgaattcctccagcaagatctctccaatgcagaccagacccctccacag
gcagcctgtagcctcagccctctgccagagtccctgggggaatctgggcctccgtttctt
ggccaccctttccagctgcctttgggcagctgtctccagcaggagggacagcagacagac
actccacctgcccttcctgagaagaagcgtaggagcgcagtctcccagaccacggacagc
tctggctgcagggtgtcctatgagcgacacccctcacagtatgacaacatctcagagggt
gacctgcagaacccagtcccagtccagcctgtgccctacccaccctttgctgctgtcctg
ccctttcagcagggggcttcgtctgcctctgctgagtttgtgggtgatttcagtgttcct
gagttggcaggtgacacagagaagccacctcctctaccagagaagaagaacaagcacatg
ctggcctacatgcaactgctggaggactactcagagccacagccctccatgttctaccag
acaccgcagagtgagcacatctaccagcagaagaacaagatgctcatggaggtgtacggc
ttcagcgactccttctgcggtagtgattccacgcaggagctggcccctccaccggctctg
ccccccaagcaacggcagctgcaggcctcctatgctgcttcttccttctctgtctcctac
tgtgtccagcaaactaaagtggccttcacccccgaggacggcagtgccgctcagggcctc
agtgtatccgtgtctaactcctttctcaaccggcacggcagcttgcctgtgccctcgtac
aaatctgtgtttaggtcttattcccaggacttcatgcctcaccaccaagcctccgtccaa
cctttccttccgcctacctcctcttcctctccacatttcccacctgtccacacgtcccag
agctcggacttagcggtgcccaccgtaagcagtccgcctcccagcaccgtggacgggcct
ctctcgtcttctcaggacagcagctttcatgggaaccctgtccgccttccttccgaaacc
tctttcactgactcggaaccaccatctgggaaggacggacatcccagagatccttcggtc
agcagtgcatctgggaaggacagcagagaaaatggagaaaggtccccaaagtcactggat
ggtctggagtcagcgcagtcagaagaggaagtggatgaactgtccctcattgaccacaat
gaaatcatggccaggctgacactcaagcaagagggtgatgatgggccagatgttcgtggt
ggttcaggagacatcttactggtccatgctactgagacagacagaaaagacctggtgctg
tactgtgaagccttcctgaccacctacaggaccttcatcagcccggaggagctcatcaag
aagctgcagtaccggtacgagaagttctctccctttgctgacacgttcaagaagcgagtg
agcaagaacacattctttgtgctggtgcgagtggtggatgagctctgcctggtggagctg
acagaggagatcctgaagctgctgatggagctggtcttccgcctagtgtgcagcggagag
ctcagcctggccagagtcctccggaagaacattctggacaaggtggaccagaagaagctg
ctcaggtgtgcccattccgaccagcctctggcagccaggggtgttgcagccaggccagga
accttgcatgatttccacagccatgagatagccgagcagctgacactgctggatgccgag
cttttctacaagatagagattcctgaagttttgctttgggccaaagagcagaatgaggag
aagagtcccaatctgacccagttcacagagcacttcaacaacatgtcctactgggtgcgg
tccatcatcatgctgcaggagaaggcccaggaccgagagaggctgctcctcaagttcatc
aagatcatgaagcacctgcgcaagctcaacaacttcaactcctacttggccatcctctca
gcactagactcggcccccatccgcagactggagtggcagcggcagacctcagagggcctg
gctgaatactgcacattgattgacagctcatcctccttccgagcctaccgggctgctctc
tcagaggtggagcccccatgtatcccgtacctaggtctgattcttcaagacctgaccttc
gttcacctgggaaacccagattatattgacgggaaagtaaacttctccaagcggtggcaa
cagttcaacatcttggacagcatgcggtgcttccagcaggcgcactatgaaatccggaga
aacgacgacatcataaatttcttcaatgacttcagtgaccacctggccgaggaagccctg
tgggaactctctctgaagatcaagcctaggaacataacaaggcgaaaaacagaccgcgaa
gagaagacctag
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integrated database retrieval system
