Malus domestica (apple): 103433423
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Entry
103433423 CDS
T03194
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
103433423
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
103433423
Transfer RNA biogenesis [BR:
mdm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
103433423
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Gene cluster
GFIT
Motif
Pfam:
RNB
PTPS
Motif
Other DBs
NCBI-GeneID:
103433423
NCBI-ProteinID:
XP_028957017
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Position
4:complement(21683836..21696256)
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AA seq
797 aa
AA seq
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MAVRAVGSSTVFRSASSSASSPTLLSFRCCPCRFTTLQFRRFSKLGIRFPIFRSGKLAPG
HGGVQSTSVHSLVNSVMEELGALRRRRLVRAAAKVELTSSGGIVEDKLVSWTLQQGLLLE
FKKDAERVLLAIAQKPDGKKNWMVSDQNGVTSSIKPQQITYIVPGVENFDHTEISDFIQK
AQDNLDPALLEFAWVELLEKNKRVTAEELAEMIFGTVEPLECYCAHLLLSEDEVYFTVLE
TKGSRSIYGPRPASQVEELLCRKLAKEAAEKELQEFKQLLKSAKAMPLDAKPLKSSWLVE
EKTRHKIESLEAYAIDACTIDDQRKTAGTILRTMGMVKTASSALNLLIDIGYFPVHVNLE
LLKLNIRTDHSDEVISSAERLLSGSSDSDEIERRDLTHLKVYAIDVDEADELDDALSAMR
LQDGRIKIWIHVADATRFLQPGSIVDREAMRRGTSVFLPTATYPMFPEKLAMEGMSLQQG
EICNAVTVSVVLHSDGSIAEYSVDNSIIKPTYMLTYESASELLHLNLQEEAELKILSEAA
TLRSIWRREQGAIDTATLEARIKVVNPEDPQPVINLYVENQADPAMRLVTEMMVLCGEVI
ATFGSRNNIPLPYRGQPQSNIDTSVFARLPEGPVRSSALVKLMRAAEIDFRKPIRHGILG
LPGYVQFTSPIRRYMDLLAHYQVKAFLAGESLPFSAGQLEGMASVVNMNVRVARRLFSSS
LRYWILEYLRRQPKEKKYRALILRFIKDRIAAILLVEVGLQSSVWVSVGAQIGDEVLVRV
EEAHPRDDVLLLKEVVI
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcgagccgtcggaagctccacagtcttccgctccgcctcctcttccgcttcc
tcccccactctcctttccttccgctgctgcccttgccgtttcactactctccaattccgc
cgattctccaaattaggcattcgtttccctatatttcggtccggtaagctagctcccggc
catggcggcgttcaaagcacctccgttcacagcctcgtcaatagcgtcatggaagagctc
ggcgccctgcgcagacggaggctagttcgcgctgccgccaaggtggagctgacaagtagt
ggagggattgtagaagataaacttgtgagctggacactgcagcaaggtctgctactggag
ttcaagaaggatgcagagagagtgttgctggccattgcgcagaaacccgatggcaagaag
aactggatggtgtccgatcagaatggtgttacatcgtcaattaaaccacaacaaattacc
tatattgttcccggtgttgagaactttgaccacacagagatatcagactttattcagaaa
gctcaagataacttggatccagcactacttgaattcgcttgggttgagctccttgaaaag
aataagcgggtgacggcagaagaattagccgagatgatatttggtaccgtggaacctctt
gaatgctactgtgctcatttgttgctttcagaagatgaagtatacttcactgtgctggag
acaaaaggttctcgctctatatatggtcctcgacctgcttcgcaggttgaggaacttctg
tgtaggaagctcgcaaaggaggctgctgagaaagaactgcaggagtttaaacaattactg
aaatctgccaaggcaatgcctttagatgctaaacctctcaaatcttcttggttggtagaa
gagaaaaccagacacaaaattgagtctcttgaagcttatgctattgatgcttgcacaatt
gatgaccaaaggaaaacagctggaacaatcctaagaacaatggggatggtcaaaacagcc
tcatcagctttgaatctcctcatagacattggctattttcctgtacatgtgaatcttgag
ctgttgaaattgaacatccgtactgatcattcagatgaagttatatcatctgcagagcgt
cttttgtcaggttcctctgattcagatgagattgaaaggcgagatctcactcacttgaag
gtctatgctattgatgtggatgaggctgatgagctcgatgatgccctgagtgcaatgagg
ctacaagatggacgcattaaaatatggattcatgttgcagatgcaactaggtttcttcaa
cctgggagcatagtagacagggaggcaatgagaagaggaacttctgtattcttgcccact
gctacttatcctatgttcccagagaaacttgccatggagggaatgagtttgcaacaagga
gagatttgcaatgcagttactgtatctgtggtgctgcactccgatggaagtattgcagaa
tattcagtggacaactcaattattaaaccaacatacatgttgacatatgagagtgcatct
gagcttcttcatttgaacctgcaagaagaggctgaactgaaaatcctgtctgaggctgca
actctccggtcaatatggcgtcgagaacagggtgcaattgacacagccacattggaagca
cgcatcaaagtggttaatccagaggatccgcagcctgtgattaatttgtacgtagaaaac
caggcagaccctgcaatgcgacttgtcactgagatgatggtgctctgcggagaagttata
gccacatttggttctagaaataacattcctttaccctacagaggacaaccccaatccaac
atcgacacctctgtatttgcacgtcttccagaaggacctgttagaagctctgctcttgtt
aaactaatgcgtgctgctgaaattgatttcagaaaacctatacgccatggaattttagga
cttccgggttatgttcagtttacatctcctatccgtagatatatggatctactagctcac
tatcaggtgaaagcatttcttgcaggggaatctcttcctttctcagctggtcagttagaa
gggatggcatctgttgtgaacatgaatgtaagagtagcaaggaggctcttcagcagcagt
cttcggtactggatattagaatatctgagaaggcagccaaaagaaaaaaagtatcgtgcg
ctgattcttagattcattaaggatcggattgcggccatattgttagttgaggtgggactt
caatcttccgtgtgggtgtccgtgggagctcaaattggagatgaagttcttgttcgggta
gaagaagctcatccacgcgatgatgtgcttttactgaaagaggttgtcatttga
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