Malus domestica (apple): 103445606
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Entry
103445606 CDS
T03194
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
mdm
Malus domestica (apple)
Pathway
mdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103445606
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mdm01009
]
103445606
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103445606
03036 Chromosome and associated proteins [BR:
mdm03036
]
103445606
Protein phosphatases and associated proteins [BR:
mdm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103445606
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103445606
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103445606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
Motif
Other DBs
NCBI-GeneID:
103445606
NCBI-ProteinID:
XP_008382840
UniProt:
A0A498IYT7
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All DBs
Position
10:27437405..27443610
Genome browser
AA seq
540 aa
AA seq
DB search
MDIDTVAGDVGSLDPELLQLPELSPFALKTSPQIAEDLFAQWLSLPQTRRLVKSLVDDAI
AGIPITAPGSTSSANTAGSNVLPSMFPAGSTPPLSPRSSPGSPRFSKPKTSPSSLRSPLK
LASEPVREAIPQFYFHNGPPPPKELKEQCLSRIDDLFSGQMDGLQLHEFKLVTKELCKLP
TFVSSAIFRKIDASCSGIVTRDAFIKYWVDGNMLTMDTATQIFKILKQSDRNYLTQVDFK
PILLELVATHPGLEFLHGTPEFQERYAETVIYRIFYYINRSGNGRLTLRELKRGNLIAAM
QHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRI
FSQIPRKFTSKVEGKMGYEDFAYFMLSEEDKSCEPSLEYWFRCIDLDGNGVLTPNELQFF
YEEQLHRMECMAQEPVLFEDILCQIVDMIAPEREDYITLADLKGCKLSGNVFNILFNLNK
FIAFESRDPFLIRQEREDPTLTEWDRFAHREYIRLSMEEDGENASNGSVEVWDESLEAPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggatatagacacagtagcaggggatgttggttctttggatcctgagcttttacagctg
ccggaattgtcaccgtttgcacttaaaaccagtcctcaaattgctgaggatttgtttgct
cagtggctttcgctcccgcagacccgtcgtttggtgaagtctctagtagatgatgcaata
gccggaattcctatcactgcacctgggagcacgtcaagtgcaaatactgctgggagcaat
gtgttaccttccatgtttccggctggaagtacacctccactttcaccaagaagttcccct
ggttctccgcgtttttcaaagccgaagactagtccttcttctcttcgctctccactaaaa
ttggctagcgaaccagtgcgagaagccattcctcagttctattttcataatggtccacca
ccaccaaaggaacttaaggagcaatgtctttctagaattgatgaccttttcagtggtcag
atggatggattgcaactgcacgagtttaagttggttacaaaggagttatgcaagctgcca
acatttgtctcttctgccatctttagaaagattgatgctagctgcagcgggatagtgacc
agggatgcattcatcaaatattgggttgatggaaacatgctcacaatggatacagcaact
caaatatttaaaattttaaagcagtctgatcgtaattaccttactcaggtagacttcaaa
cccattcttctagagcttgtggcaactcatccagggttggaatttttacatggaactcct
gaatttcaagaaagatatgctgaaactgtaatatacagaatattttactacataaacaga
tcaggaaatggtcgccttacccttagggagctaaaacgaggaaatctaattgctgccatg
caacatgcagatgaggaagaggacattaacaaagttctaaggtacttctcatatgaacat
ttttatgtcatatactgcaaattttgggagctggacacagaccacgatttcttgatcgac
aaagagaatcttattagatatggtaatcatgcccttacctacaggatcgttgatagaata
ttttcacagattccgaggaaatttactagcaaggttgaagggaagatgggttatgaagat
tttgcttacttcatgttgtcagaggaggataagtcgtgtgagcctagccttgagtattgg
ttcagatgtatagatctggatggaaatggagttcttacacccaatgagttgcagtttttt
tatgaggagcagctgcatcgtatggaatgcatggcccaagagcctgttctatttgaggat
attttgtgccaaatagttgacatgattgcaccagagagggaagattatatcactctagct
gacttgaaaggttgcaaactttcaggaaatgtcttcaatatccttttcaaccttaataaa
ttcatagcttttgaaagtcgcgatccatttcttattcgtcaggaacgtgaggatccaact
ttgactgagtgggaccgctttgcacacagagaatatatacggctgtcaatggaagaagat
ggtgagaatgcctctaatggaagtgtagaagtttgggacgaatcactcgaggctcctttt
taa
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