Candidatus Megaira endosymbiont of Mesostigma viride: LF888_01280
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Entry
LF888_01280 CDS
T07589
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
menm
Candidatus Megaira endosymbiont of Mesostigma viride
Pathway
menm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
menm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LF888_01280 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
menm03400
]
LF888_01280 (nth)
Enzymes [BR:
menm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LF888_01280 (nth)
DNA repair and recombination proteins [BR:
menm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LF888_01280 (nth)
Prokaryotic type
LF888_01280 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
DUF2400
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UCM94334
LinkDB
All DBs
Position
complement(332420..333052)
Genome browser
AA seq
210 aa
AA seq
DB search
MNLNTINQIFTIFSSLSKEPKTELEYVNNFTLAVAVILSAQATDVSVNKATSTLFKIYKT
PEDFLKLGEDNLKKYIKTIGLYNTKAKNIIAFCKMLVEHYDSNLPNSFEELIKLPGIGQK
TANVILNCAFGQPTIAVDTHVARVSHRIGLTQETTPKKIEKDLLRQIPTMWLTHAHHWLI
LHGRYICKARKPECFKCPICHLCEYKSKNV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaatacaataaaccaaatttttaccatttttagctctttaagtaaagaaccg
aaaacagaacttgaatatgttaataatttcaccctagcggtagcggttattttatctgcc
caagcaactgatgtttctgttaataaggcaacctccacgctatttaaaatttataaaact
ccggaagattttttaaaactcggcgaggataatctaaaaaaatatataaaaactattggt
ttatataatactaaagcaaaaaatattattgcgttctgtaagatgttagttgagcactac
gactcaaatcttccgaatagttttgaagaacttataaaattaccaggtatagggcaaaaa
accgcaaatgttatattaaattgtgcattcggccagccaacaatagccgttgatacccat
gtcgctcgagtttcacatagaattggtttaacgcaggaaactacacctaaaaaaatagaa
aaggacttattaaggcaaattcctactatgtggttaacgcatgcccatcactggctgata
ttacacggaagatatatttgtaaagccagaaaacctgaatgttttaaatgccctatttgt
catctatgtgaatataaaagtaaaaatgtataa
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