Notothenia coriiceps (black rockcod): 104946555
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Entry
104946555 CDS
T04920
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104946555 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104946555 (nthl1)
Enzymes [BR:
ncc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
104946555 (nthl1)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104946555 (nthl1)
Prokaryotic type
104946555 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
104946555
NCBI-ProteinID:
XP_010770720
UniProt:
A0A6I9N992
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MPQVRWKTRFCYVVRTLTMTSPYFMQSRPVITRSGDQNAASLRSKLTTRRRNQGPGSSVE
VKVEPEEARISEQRPSSAPLSTETDALPLSSHSRRRKQLKVEYDEDEGVQPVKTEHWEPP
DWKKQLGYIREMRSSRDAPVDNMGAEKTYDSDATAHVRRFQVLVSLMLSSQTKDQVTAAA
MKRLRAHGCTAESILNTDDEALGKLIYPVGFWRTKVKYLKLTSAILQKEFGGDIPDSVQG
LVRLTGVGPKMAHLAMDIAWDQVSGIGVDTHVHRISNRLGWLKKPTKSPEQTRKALEEWL
PRELWSEINWLLVGFGQQVCLPVRPLCSVCLNQHSCPSAHKISPTKRPKAASPCSPDPTS
ASTVKTEPGQESDVKHERLKKEPLPTPVSPNAPKRKIKTKVKY
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtccgctggaaaacgaggttctgttatgtagtccggactttaactatgacc
tctccttatttcatgcagagcagacctgttatcactcggagcggtgatcaaaatgcagcc
tctctcaggtccaaactcaccaccagacgtaggaatcagggtccaggttcctctgtggag
gtgaaggtagagccggaggaggcgaggatctcggagcaaagaccctcctcggccccctta
tccacggaaacagacgccttgccgttgtcttcacacagccgcagaaggaaacagctcaaa
gtggaatatgatgaagatgaaggtgtacagccggtgaagacagaacactgggaacctccc
gactggaagaaacaattgggatacatccgtgagatgaggagcagccgggatgcacctgta
gataacatgggggcagagaaaacctacgactcagacgctactgctcatgtcagacgtttc
caggtgttggtttcactcatgctgtccagtcagaccaaggaccaggtgaccgcagcagcc
atgaagaggctccgagctcacggctgcactgcagaaagtattcttaatactgatgatgaa
gcactggggaaactcatctaccctgtgggcttctggaggactaaggtgaagtatctgaag
ctgacatcggccattctgcagaaagagtttggaggggacatcccagacagcgtgcagggg
ctggtccgcctaacaggagtcggacctaagatggctcatctggctatggacatcgcatgg
gaccaggtgtccggcatcggcgtggacacacacgtgcatcgtatctctaataggctgggc
tggctgaagaaaccgaccaagagcccggagcaaacgcgcaaggccctggaggagtggtta
ccaagggagctgtggagtgagatcaactggctgctggtgggtttcgggcagcaggtgtgc
ctccccgtcaggcctctctgctccgtgtgtctgaaccagcacagctgtccctccgcccac
aaaatctctcctacaaaaaggcctaaagctgcttccccctgctcccctgatccaacctct
gcctccacagtaaagactgaacctggacaagaatcagatgttaaacatgagaggttaaag
aaggagccactgcccacacctgtttccccaaacgcaccgaaacggaagataaaaaccaag
gttaaatattga
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