Nannospalax galili (Upper Galilee mountains blind mole rat): 103748644
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Entry
103748644 CDS
T03372
Symbol
Tap1
Name
(RefSeq) transporter 1, ATP binding cassette subfamily B member
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi02010
ABC transporters
ngi04145
Phagosome
ngi04612
Antigen processing and presentation
ngi05163
Human cytomegalovirus infection
ngi05168
Herpes simplex virus 1 infection
ngi05169
Epstein-Barr virus infection
ngi05170
Human immunodeficiency virus 1 infection
ngi05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103748644 (Tap1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103748644 (Tap1)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
103748644 (Tap1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
103748644 (Tap1)
05168 Herpes simplex virus 1 infection
103748644 (Tap1)
05163 Human cytomegalovirus infection
103748644 (Tap1)
05169 Epstein-Barr virus infection
103748644 (Tap1)
09163 Immune disease
05340 Primary immunodeficiency
103748644 (Tap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngi02000
]
103748644 (Tap1)
Enzymes [BR:
ngi01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
103748644 (Tap1)
Transporters [BR:
ngi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
103748644 (Tap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_29
AAA_21
AAA_23
AAA_15
SMC_N
AAA_22
AAA_16
AAA_30
DUF87
AAA_25
AAA_33
SRP54
AAA_18
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
103748644
NCBI-ProteinID:
XP_008849607
LinkDB
All DBs
Position
Un
AA seq
600 aa
AA seq
DB search
MALHAWLGTALLLLADWVLLRPALPGIVSVLVPKEWPLFWIWAVGLSRWAVLGLGVHGVL
KASGPHEGETAGTHGWLGALQPLAAVLGLVLPVLALIRELASWVALLDHDSTRLLHWGSR
PEAFVLGYVAALSAAALWHKLGGLLVASSQGAAGDLVRRLLSFLGSEMCCLPLVLVLLIL
SCVGEMAIPFFTGRLADWILPDKTAPAFTRNITLMSVLTIASAVLEFTGDGIYNYTMGYL
HSRLHGEVFHAVLRQETEFFLQNQTGSVTSRVTEDTSKVCESISDKLNLLMWYLVRGLCL
LGVMFWGSPSLTMVTLAALPLLFLLPKKLGEKTQLLAVQIQDSLAESTQVAVEALSAMPT
VRSFANEEGEAQKFRQKLEEMKTLNKKEALAYVANLWTISFQDVSFAYPNNPDVLVLQGL
TFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGHPISEYEHRYLHRQVAAV
GQEPQLFGRSFRENIAYGLIWTPTMEEITTVAMMSGAHNFISGLPQGYDTGLVQQLLYES
PERASRTVLLITQQLSLVEQAHHILFLKGGTICEQGTHEQLMEKRGHYRAMVEAPAGAPK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctctccacgcgtggctggggaccgcgctgctgctgcttgcagactgggtgctgctg
cggcccgcgctccctggaatagtctccgtgctggttccgaaggagtggccgctgttctgg
atctgggcggtgggcctgagccgctgggccgtgctgggactgggggtgcacggggtcctg
aaggcaagtgggccccacgagggagaaaccgcaggaacccatggatggctgggtgctttg
cagccgctggcggcagtgctgggcttggtcctgccggtgcttgccttgatccgagagctg
gcctcctgggtagccctccttgatcatgacagcaccagacttctgcactggggcagtcgc
ccggaagccttcgtcctcggctatgtggccgcactgtctgcagccgccctatggcacaag
ttggggggcctcttggtggccagcagccaaggggccgctggggacttggtgcgtcggcta
ctaagtttcctgggctccgagatgtgctgccttccgctggttctggttctgctgatcctc
tcctgtgttggggagatggccattcccttctttacaggccgcctcgctgactggattcta
ccagataagacagcccctgccttcaccaggaacataactctgatgtctgtgctcaccata
gccagtgcagtgttggagttcaccggcgatgggatttataactacactatgggctacttg
cacagtcgtttgcatggagaggtgtttcacgctgtcctgcgtcaggagacagagtttttc
ctgcagaaccaaacaggttctgtcacatctcgggtaaccgaggacacatccaaggtgtgc
gagtctatcagtgacaagctgaatcttctgatgtggtacctggtgcgaggcctgtgtctc
ctgggggtcatgttctgggggtcaccatccctcaccatggtcaccttggctgccctgcct
ctgcttttccttctgcctaagaagctgggggaaaagacccagttactggcagtacagatt
caggactctctggcagagtccacccaggtggccgttgaggccctgtcagctatgcccaca
gtccggagctttgccaatgaggagggagaggcccagaagtttcgccagaaactggaggag
atgaagaccctaaacaagaaggaggccttggcctatgtagccaacctctggaccatcagt
ttccaagatgtctcctttgcttacccaaacaatccagatgttttggtcctacagggtctg
acattcactttacgtcctggagaggtgacggcgctggtggggcccaatgggtcggggaag
agcaccgtggctgccctgctgcagaatctgtaccagcccaccgggggccagctgctgctg
gatggccatcccatctcggaatatgagcatcgctacctgcaccgtcaggtggccgcagtg
gggcaggagccacagctgtttggaagaagttttcgagaaaatattgcctatggcctgatc
tggactccaaccatggaggaaatcaccactgtggccatgatgtccggagcccataatttt
atctctggactcccccagggctacgatacaggtctcgtccagcagctcctgtatgagagc
ccagagcgggcctcccggacggtgcttcttatcacccagcagctcagcctggtggagcag
gcccaccacatcctctttctgaagggaggcaccatctgtgagcagggcacccacgagcaa
ctcatggagaagagggggcactatcgggctatggtggaggctcctgcaggagctcccaag
tga
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