Neisseria lactamica: NLA_15760
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Entry
NLA_15760 CDS
T01368
Symbol
ligA
Name
(GenBank) putative DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nla
Neisseria lactamica
Pathway
nla03030
DNA replication
nla03410
Base excision repair
nla03420
Nucleotide excision repair
nla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLA_15760 (ligA)
03410 Base excision repair
NLA_15760 (ligA)
03420 Nucleotide excision repair
NLA_15760 (ligA)
03430 Mismatch repair
NLA_15760 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nla03032
]
NLA_15760 (ligA)
03400 DNA repair and recombination proteins [BR:
nla03400
]
NLA_15760 (ligA)
Enzymes [BR:
nla01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NLA_15760 (ligA)
DNA replication proteins [BR:
nla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NLA_15760 (ligA)
DNA repair and recombination proteins [BR:
nla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NLA_15760 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NLA_15760 (ligA)
MMR (mismatch excision repair)
DNA ligase
NLA_15760 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NLA_15760 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CBN87785
UniProt:
E4ZEJ9
LinkDB
All DBs
Position
1694435..1696918
Genome browser
AA seq
827 aa
AA seq
DB search
MPSENLSAMNPTAQRIHELTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPEL
KLPDSPTQRVGGEPLAGFDEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDERVRNGLN
GEQPEYVIEPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTRNVKTVANIPLRLHGENT
PELIEVRGEVLMLKADFAALNKRQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFP
YSVARQQGGFVAEAHIQELAYFQELGFSLPDGNFGCFKNIGEVLAFYGQMQQKRPELPYE
IDGMVVKVNSLAQQRELGFISRAPRWAVAHKFPAEEALTIVEAIDVQIGRTGAVTPVARL
QPVFVGGVTVTNATLHNQDEVSRKDVRIGDTVVVRRAGDVIPEVVRVIFERRPMQETAVA
VSDGIGHRQDDLFAETPSAGQTRSVPLHKPYRLPTRCPICRSEIEREEGEAVARCSGGML
CQAQRAQGLIHFASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADK
TVAESDQMPSEVSSVGASGKHKKQPVKWAENILGGIESGKTPELARFLFALGIRHVGERT
AKTLAQAFGTLERVRRAPEPILACLPDIGTVVAHSIAHFFAQAEQQAMIDELLAAGVAPQ
AQAVSLPVAQYAEPQRWIARLPGFKISENKAQALWELAGQSIKGLQNDKALPADWQAWRS
ETQNAVLLENLKTFFAQMPSEDETAQGSDGINEAVAGKTFVLTGTLPTLKRDQAQALIEA
AGGKVSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgaaaacctatccgccatgaacccgaccgcacaacgcatacacgaactcacc
gacctgctcaaccgctacgcctacgaatactacaccctagacgcgcccagcgtacccgat
gccgaatacgacaaattattccgtgaactcgaagcgttggagttaaaccatcccgagctc
aagctgcccgacagcccgacccagcgcgtcggcggcgagcctttggcaggctttgacgaa
gtacgccacgaagtgccgatgctgtcactgaccaacgccttctccccgcaagatgaaaac
ggcgtgttcgaccacgccgaaatgtatgcttttgatgaacgtgtgcgtaacggtttaaac
ggcgaacaaccggaatatgtaatcgaacccaaattcgacggactcgccatcagcctgctc
taccgcgacggcgtattggtacaggcggcaacacgcggcgacggcacgaccggcgaagac
gtaacccgaaacgtcaaaaccgtcgccaacatccccctgcggctgcacggcgaaaatacg
cccgaactcatcgaagtgcgcggcgaagtgctgatgctcaaagccgatttcgccgccctc
aataaaagacaagccgaaaacgggcaaaaaccctttgccaatccgcgcaatgccgccgcc
ggcagcctgcgccaactcgattcgcgcattaccgcgcaacgcaaactgcactttttcccc
tactccgtcgcccgtcagcaaggcggtttcgtcgcggaagcacacatccaagaactcgcc
tatttccaagagctcggcttcagcctgcccgacggcaatttcggctgcttcaaaaatatc
ggcgaagtattggcgttttacggacaaatgcagcaaaaacgccccgaactgccctacgaa
atcgacggtatggtcgtcaaagtcaacagcctggcgcaacagcgcgaactcggcttcatc
tcccgtgctccgcgctgggcggttgcccacaagttccctgccgaagaagcattaaccatt
gtcgaagccatcgatgtgcaaatcgggcgcaccggcgcggtaacgccggttgcccgcctg
caacccgtattcgtcggcggcgtcaccgtcaccaacgccaccctgcacaatcaggacgaa
gtgtcccgaaaagacgtgcgcatcggcgataccgtcgtcgtgcgccgcgccggagacgtg
attcccgaagtcgtgcgtgtgattttcgaacgccgtccgatgcaggaaaccgccgttgcc
gtttcagacggcatcggacatcggcaggacgatttgttcgccgaaacaccgtccgccggg
caaacccgatccgttccgctccacaagccctaccgcctgccgacccgctgccccatctgc
cgcagcgaaatcgaacgcgaagaaggcgaagccgtcgcccgatgcagcggcggcatgctt
tgtcaggcgcaacgcgcgcaaggcttaatccacttcgcctcgcgtaaagcgatggacatc
gacggcttgggtgaaaaacaaatcgaacagctggtcgcccaagacctcgtccgccacttc
gccgacctctaccgcctcgacatcccgaccttgcaaaaaatgaaggaaacggcggacaaa
accgttgccgaatcggatcaaatgccgtctgaagtcagttcggtcggcgcgtcgggcaaa
cataaaaaacaaccggtcaagtgggcggaaaacatcctcgggggcatagaatccggcaaa
acacccgaactcgcccgcttcctgttcgcgctcggcatccgccacgtcggcgaacgcacc
gccaaaacactggcgcaggcattcggcacattggaacgcgtccgccgcgcacccgaaccc
atcctcgcctgcctgcccgacatcggcacggtagtggcgcattccatcgcccacttcttc
gcccaagccgaacagcaggcgatgatagacgaactgcttgccgcaggcgttgccccgcaa
gcccaagccgtcagcctgcccgtcgcacaatatgccgaaccgcaacgctggatcgcccgc
ctgcccggcttcaaaatcagcgaaaacaaagcccaagccttatgggaactcgccgggcaa
agcataaaagggctgcaaaacgacaaagccctccctgccgactggcaggcgtggcgcagc
gaaacacaaaacgccgtcctgcttgaaaacctgaaaaccttcttcgcgcaaatgccgtct
gaagacgagacggcgcaaggttcagacggcatcaacgaagccgtagcaggcaaaaccttt
gtattaaccggcaccctgcccaccctcaaacgcgaccaagcccaagccctaatcgaagcc
gcaggcggcaaagtgtccggcagcgtgtccaaaaaaaccgactacgtcgtcgccggagaa
gccgctggcagcaagctggaaaaagccaatgccttgggcgtttccgtcctcagcgaagcc
gaactgcttaccctgctcggctga
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