Numida meleagris (helmeted guineafowl): 110401104 Help Entry 110401104         CDS       T06015                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism nmel  Numida meleagris (helmeted guineafowl) Pathway nmel04010   MAPK signaling pathway nmel04120   Ubiquitin mediated proteolysis nmel04140   Autophagy - animal nmel04144   Endocytosis nmel04620   Toll-like receptor signaling pathway nmel04621   NOD-like receptor signaling pathway nmel04622   RIG-I-like receptor signaling pathway nmel05132   Salmonella infection nmel05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:nmel00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     110401104 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     110401104 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     110401104 (TRAF6)    04140 Autophagy - animal     110401104 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     110401104 (TRAF6)    04621 NOD-like receptor signaling pathway     110401104 (TRAF6)    04622 RIG-I-like receptor signaling pathway     110401104 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     110401104 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     110401104 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:nmel04131]     110401104 (TRAF6)    04121 Ubiquitin system [BR:nmel04121]     110401104 (TRAF6) Enzymes [BR:nmel01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      110401104 (TRAF6) Membrane trafficking [BR:nmel04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     110401104 (TRAF6) Ubiquitin system [BR:nmel04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     110401104 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Med21 SlyX PspA_IM30 TRAF3_RING zf-RING_11 Sina_ZnF UPF0242 HAP1_N DUF4455 Spc29 U-box CENP-F_leu_zip DUF1664 zf-U1 DUF2730 HMMR_N DUF16 ADIP Motif Other DBs NCBI-GeneID:  110401104 NCBI-ProteinID:  XP_021257472 LinkDB All DBs Position 6:complement(19700681..19727147) Genome browser AA seq 545 aa AA seqDB search MSLLHSDSSCGARDMDGGCCAAMASACSGGAKEDSVSVGSGTGNPPSSFTEETQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLTVKCPNKGCCMKMELRHLEEHQLHCDFTAVECPQCQGAFQKNHLKEHMTQ ECPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTMLIRQQMPNHYDNDCPTAPV PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSIQNISVTATNPVPFINGLPFEPAL FSHVSHAPYNCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL AFQRPTIHRNPKGFGYVTFMHLQTLKQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARS TDGAA NT seq 1638 nt NT seq  +upstreamnt  +downstreamnt atgagcttgctacacagcgacagcagctgtggagcccgagacatggatggcggctgctgc gcagccatggccagcgcctgcagcggtggagccaaagaagacagcgtgagcgtgggcagc gggactggcaacccgcccagctccttcacggaggagacgcagggatacgatgtggagttc gatccgcccttggagagcaaatatgagtgtcccatctgtttgatggccctccgggaggct gtgcagacaccgtgtgggcaccgtttctgcaaaggctgcattgtcaaatcaataagagat gcaggtcacaaatgtccagtagacaacgaaattctactggaaaatcaactttttccagac aacttcgctaaacgggaaatcctttcgctaacggttaagtgtcccaacaagggctgctgt atgaagatggagctgagacatttagaggagcaccagttgcactgtgatttcactgctgtg gaatgtccacagtgccaaggagcctttcagaagaaccacctcaaagagcacatgacacag gagtgtccgcggcgtcaagtctgttgtccaaactgtgccacatctatggcttatgaagat aaagagcttcatgaccaaacctgcccacttgccaatgtattctgtgaatattgcaacacg atgctcatcaggcagcagatgcctaaccattacgataatgactgtcctactgccccagta ccatgcttttacagtgcctttgggtgtcctgaaaagatgcagaggaatgaactagcacga cacatgcaggaattcactcaggttcacatgagaatgatggctcagagcattcaaaatatc agtgttactgctacaaacccagtaccctttatcaacggcctaccgtttgagcctgccctc ttctcccatgtgtcacatgccccatataattgtaatccggaagttgagaactttaaagaa actattcagcagttggaaggtcgtctggtgagacaagatcaccaaatcagagaactcatt gcaaaaatggagacgcagaacactcacatggcggaactcaaacgtaccatccgaaatctg gagggaaagattactgaaatggaggcccagcagtgcaatggtatttacatctggaagata gagaatttcagtggacttcagaaagcccaggaagaagagagacctgttgtgatgcacagt cctggcttctatactggaaaacctggctacaagctgtgtttgcgcttgcatatccagtta ccaaatgctcagcggtgtgctaattttatatctctgtttgtccacacgatgcaaggagag tatgacagccatctgccttggccgttccaaggcactatacgactttctattttggatcaa tcagaaggccctgaaaggcagaatcacgaagaagtaatggaagccaagccagagttacta gccttccagagaccaacaattcaccgcaatccgaaaggttttggttatgtgactttcatg cacctgcagactttgaagcaaagaacctttgtaaaggacgatacccttctggtgcgctgt gaagttctaacacgcctagacttaaacagccttcgcagggaaggatttcaagctcgcagt accgatggagctgcgtaa

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