Neisseria mucosa ATCC 19696: NM96_07775
Help
Entry
NM96_07775 CDS
T05436
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nmj
Neisseria mucosa ATCC 19696
Pathway
nmj03030
DNA replication
nmj03410
Base excision repair
nmj03420
Nucleotide excision repair
nmj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NM96_07775
03410 Base excision repair
NM96_07775
03420 Nucleotide excision repair
NM96_07775
03430 Mismatch repair
NM96_07775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmj03032
]
NM96_07775
03400 DNA repair and recombination proteins [BR:
nmj03400
]
NM96_07775
Enzymes [BR:
nmj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NM96_07775
DNA replication proteins [BR:
nmj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NM96_07775
DNA repair and recombination proteins [BR:
nmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NM96_07775
NER (nucleotide excision repair)
GGR (global genome repair) factors
NM96_07775
MMR (mismatch excision repair)
DNA ligase
NM96_07775
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NM96_07775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
BRCT_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AVR79242
LinkDB
All DBs
Position
1547421..1549892
Genome browser
AA seq
823 aa
AA seq
DB search
MNPTAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALERNHPELKLPDSPTQ
RVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNPEYVI
EPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNVKTVANIPLRLHGDNPPEFIEVRG
EVLMLKADFTALNKRQTENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQG
GFVAEEHIQELAYFQELGFSLPDGNFGCFKNIDEVLAFYEQMQQKRPELPYEIDGMVVKV
NSLAQQRELGFISRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGV
TVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDDLKHQ
QDDLFAETPSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQG
LIHFASRKAMDIDGLGQKQIEQLVAQNLVRHFADLYRLNIPTLQKMKETADKGSSENENG
DAETVSDDLSESNTQNSKKQPTKWAENILAGIEASKTPELARFLFALGIRHVGERTAKTL
AQAFGSLEHVRRAPEPILACLPDIGTVVARSIAHFFAQDAQQAMIDELLAAGVAPQTQAV
TIPPARHAEPQRWIARLPGFKISENKAQALWELAGKSIEGLQTDKTLPADWQAWRSETQN
AALLENLKTFFAQTSSENQGATVSDDLNEAVAGKTFVLTGTLPTLKRDQAQALIEAAGGK
VSGSVSKKTDYVVAGEAAGSKLEKANALGVAVLSEEELLAMLG
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgaccgcacaacacatccgccacctcaccgacctcctcaaccgctacgcctac
gaatactacaccctcgacgcgcccagcgtacccgatgccgaatacgacaaattattccgc
gaactcgaagcgttggaacgaaaccatcccgaactcaaactgcccgacagcccgacccag
cgcgtcggcggcgagcctttggcgggatttgccgaagtgcgccacgaagtgccgatgctg
tcgctgaccaacgccttttccccgcaagatgaaaacggcgtgttcgaccatgccgaaatg
tacgccttcgaccaacgcgtgcgcgacggcttggacggcggcaatcccgaatacgttatc
gaacccaaattcgacggcctcgccatcagtctgctctaccgcgacggcgtattggtgcag
gcggcgacgcgaggcgatggcacgactggcgaagacgttacccaaaatgtcaaaaccgtc
gccaacatccccctgcggctgcacggcgataatccgcccgaattcatcgaagtccgcggc
gaagtgctgatgctcaaagccgactttaccgccctcaataaaagacaaaccgaaaacggg
caaaaaccctttgccaatccgcgcaatgccgccgccggcagcctgcgccaactcgattcg
cgcatcaccgcgcaacgcaaactacactttttcccctactccgtcgcccgtcagcaaggc
ggtttcgtcgcggaagaacacatccaagaactcgcctatttccaagaactcggcttcagc
ctgcccgacggcaatttcggctgtttcaaaaatatcgacgaagtattggcgttttacgaa
caaatgcagcaaaaacgccccgaactgccctacgaaatcgacggcatggtcgtcaaagtc
aacagcttggcgcaacagcgtgaactcggcttcatctcccgcgcgccgcgctgggcgatt
gcccacaaatttcccgccgaagaagccctgaccatcgtcgaagcgattgacgtgcaaatc
gggcgcaccggcgcggttacccccgtcgcccgcctgcaacccgtattcgtcggcggcgtc
accgtcaccaacgccaccctgcacaatcaggacgaagtatcgcgcaaagacgtgcgcgtc
ggcgacaccgtcgtcgtgcgccgcgccggagacgtgattcctgaagtcgtgcgcgtgatt
ttcgaacgccgcccgatgcaggaaaccgccgttgccgtttcagacgacctcaagcatcag
caagacgacctgtttgccgaaacaccgtccgccaatcaaacccaatccgttccgctccac
aagccctaccgcctgccaacccattgccccatttgccgcagcgaaatcgaacgcgaagaa
ggcgaagccgtcgcccgatgcagcggcggcatgctgtgtcaggcgcaacgcgcgcaaggc
ttaatccacttcgcctcacgcaaagccatggacatcgacggcctcggtcaaaaacaaatc
gagcagctggtcgcccaaaacctcgtccgccatttcgccgacctctaccgcctcaacatc
ccgaccttgcaaaaaatgaaggaaacggcggataaagggtcgtctgaaaacgaaaacggt
gacgcagaaacggtttcagacgacctgtctgaatccaacacccaaaacagcaaaaaacaa
ccgaccaagtgggcggaaaacatcctcgcaggcatagaagccagcaaaacgcccgaactc
gcccgcttcctgttcgcgctcggcatccgccacgtcggcgaacgcaccgccaaaacgctg
gcgcaggcattcggctcgctggaacatgtccgccgcgcacccgaacccatcctcgcctgc
ctgcccgacatcggcaccgtcgtcgcccgctccatcgcccacttcttcgcccaagacgcg
cagcaggcgatgatagatgagctgctcgccgcaggcgttgccccgcaaacccaagccgtt
accatcccgcccgcccgccacgccgagccgcaacgctggattgcccgcctgcccggtttc
aaaatcagcgaaaacaaagcccaagccttatgggaactcgccggcaaaagcatagagggc
ctgcaaaccgacaaaaccctccccgccgactggcaagcatggcgcagcgaaacacaaaac
gccgccctgctcgaaaacctgaaaaccttcttcgcacaaacgtcgtctgaaaaccaagga
gcaacagtttcagacgacctcaatgaagccgtagcaggcaaaaccttcgtgttaaccggc
accctgcccaccctcaaacgcgaccaagcccaagccttgatcgaagccgcaggcggcaaa
gtttccggcagcgtgtccaaaaaaaccgactacgtcgtcgccggagaagccgcaggcagc
aagctggaaaaagccaatgccttgggtgtggcggttttgagcgaggaagagcttttggcg
atgctgggctga
DBGET
integrated database retrieval system
