Novosphingobium sp. THN1: C7W88_06100
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Entry
C7W88_06100 CDS
T05635
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
not
Novosphingobium sp. THN1
Pathway
not03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
not00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C7W88_06100 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
not03400
]
C7W88_06100 (nth)
Enzymes [BR:
not01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C7W88_06100 (nth)
DNA repair and recombination proteins [BR:
not03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C7W88_06100 (nth)
Prokaryotic type
C7W88_06100 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AXU18709
UniProt:
A0A3B7DJ13
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All DBs
Position
complement(1238874..1239551)
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AA seq
225 aa
AA seq
DB search
MKTADIFEFFRRLAEANPSPETELEYGNVYQLLVAVTLSAQATDVGVNKATRKLFANVKT
PQDMLDLGEEGLKQHIKTIGLFNSKARNVMAMAEILVEKYGGEVPADRDLLTELPGVGRK
TANVVMNCAFGAETFAVDTHIFRVGNRTGLAKGKTPLAVEKGLERHVPQPFRVGAHHWLI
LHGRYVCKARTPECWHCGVVDLCSFKGKVLEKGPSRRKRSRQRPP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggcggacatcttcgaattcttccgccgcctcgccgaggccaacccctcgccc
gaaacggagctggaatacggcaacgtctaccagctgctggtcgcggtgacgctttccgcg
caggcgaccgacgtcggcgtcaacaaggcgacgcgcaagctcttcgccaacgtcaagacg
ccgcaggacatgctcgatcttggcgaggagggtctgaagcaacacatcaagaccatcggc
ctgttcaattccaaagccaggaacgtgatggccatggccgaaatcctggtcgagaaatac
ggcggcgaggttccggcggaccgcgatctcctgaccgaactgcccggcgtcggccgcaag
acggccaacgtggtgatgaactgcgcgttcggagcggaaacctttgccgtcgacacgcat
atcttccgcgtcggcaatcgcaccggccttgcgaagggaaagacaccgctcgccgttgag
aaggggctggagagacacgttccccagccgtttcgcgtcggtgcgcaccactggctgatc
ctccatggacgctatgtgtgcaaggcgcggacgcccgaatgctggcactgtggggtggtt
gatctttgcagcttcaagggcaaggttcttgagaaagggccaagccgccgcaagcgaagc
aggcaaagacccccttga
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