Novosphingobium sp. THN1: C7W88_09770
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Entry
C7W88_09770 CDS
T05635
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00300
Lysine biosynthesis
not00550
Peptidoglycan biosynthesis
not01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
not00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C7W88_09770
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C7W88_09770
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
not01011
]
C7W88_09770
Enzymes [BR:
not01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
C7W88_09770
Peptidoglycan biosynthesis and degradation proteins [BR:
not01011
]
Precursor biosynthesis
Amino acid ligase
C7W88_09770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AXU19255
UniProt:
A0A3B7DND4
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All DBs
Position
1962986..1964434
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AA seq
482 aa
AA seq
DB search
MKLGAILEAAGFAGKNADANVTGFAIDHRKVAPGTIFGAFPGTRFNGEDFIADAVKAGAV
AVVARPQAKVEGAVHVADEEPRRAFAALAARFFQPVPETVVAVTGTNGKTSTVEMTRQIW
RMAGYSAASIGTLGVTTADESVSTGLTTPDIVTFLSNMTGLAREGVTHVAYEASSHGLSQ
YRNEGLRVGAGAFTNLSRDHLDYHATMDDYFAAKMRLFDHVVEESGTAVVWMDDEWSGRV
VEHVRARGLRLLSVGKQGTEIRLLARTPTQLGQTLEIAFEGQARKINLPLIGAYQAANAL
VSAGLAIASGTDAAKVFDALARLQPVRGRLERAAINRAGAPVYVDYAHTPDAIEAAIAAL
RPHTSGRLITVFGAGGDRDGGKRPEMGSAACAGSDLVIVTDDNPRGEDPAEIRAAIMAGC
DEKAREIGDRRAAIAAAIAEAGREDIVLVAGKGHEQGQIVGRGDAVRILPFDDVQVAREC
TT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcggcgcgatccttgaagcggcgggtttcgctggcaagaacgctgatgcgaac
gtcaccggctttgccatcgatcatcgcaaggttgccccgggaacgatcttcggtgccttt
ccaggcacgcgcttcaatggcgaggacttcattgccgatgccgtgaaggcgggcgctgtc
gccgtggtcgcgcggccgcaggccaaggtcgaaggggcggtgcacgttgccgatgaagag
ccgcgccgcgcctttgccgcgctggccgcgcgctttttccagcctgtgcccgagaccgtt
gttgccgttacggggaccaacggcaagacctcaacggttgaaatgacgcgccagatctgg
cgcatggccggctattctgcggcgtcgatcggcacgctcggcgtgaccacggcagacgaa
agcgtctctaccgggctgaccacgccggacatcgtgacgttcctttcgaacatgaccggc
cttgcccgcgagggtgtgacacatgtcgcctacgaagcgtcgagccatggcctctcgcag
taccgcaacgagggcctgcgcgtgggggcaggggcctttaccaacctcagccgcgaccat
ctcgattaccacgcgacgatggacgattacttcgcggccaagatgcgcctgttcgaccat
gtcgtggaagagagcggcacggcggtcgtctggatggacgacgagtggtcgggacgggtg
gtggagcatgtccgcgcgaggggtctgcggttgctctcggtgggcaagcaggggaccgag
atccgcctgctcgcccgtaccccgacccaactggggcagaccctcgagatcgcgttcgaa
ggccaggcgcgcaagatcaacctgccgctgatcggcgcctatcaggcggcgaacgcgctg
gtttccgccgggctggcaattgcttcagggaccgatgcggccaaggtgttcgatgcgctg
gcgcggttgcaaccggtgcgggggcggctggagcgcgcggcgatcaatcgtgccggggcg
ccggtctatgtcgactacgcgcacacgcccgacgccatcgaagcggcgattgccgcgctg
cgcccgcatacgtccgggcgcctgatcaccgtgttcggtgctggcggtgaccgcgacggc
ggcaagcgtccggagatgggaagtgctgcctgtgccggctcggatctggtgattgtcacg
gatgacaatccccgtggtgaagatcccgcggaaatccgcgccgccatcatggcgggctgc
gacgaaaaggcgcgcgagatcggcgatcgtcgtgccgcgattgccgccgcgatcgccgag
gcaggccgtgaagacattgtccttgttgcagggaaggggcacgaacagggacagatcgtg
ggcaggggcgatgctgtccgcatcctgccgtttgacgatgttcaggtcgccagggagtgc
accacatga
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