Oreochromis aureus (blue tilapia): 116323655
Help
Entry
116323655 CDS
T07295
Symbol
kdm2ba
Name
(RefSeq) lysine (K)-specific demethylase 2Ba isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116323655 (kdm2ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116323655 (kdm2ba)
04121 Ubiquitin system [BR:
oau04121
]
116323655 (kdm2ba)
03036 Chromosome and associated proteins [BR:
oau03036
]
116323655 (kdm2ba)
Enzymes [BR:
oau01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
116323655 (kdm2ba)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
116323655 (kdm2ba)
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
116323655 (kdm2ba)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
116323655 (kdm2ba)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
116323655 (kdm2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
LRR_4
Motif
Other DBs
NCBI-GeneID:
116323655
NCBI-ProteinID:
XP_031599903
Ensembl:
ENSOABG00000000355
LinkDB
All DBs
Position
LG12:complement(26595529..26608062)
Genome browser
AA seq
780 aa
AA seq
DB search
MALSLSGDDEEYDSESEQQRAANRPKPKMGTSSAVKLPSNRSSSGARRRRTRCRKCEACL
RSECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCKEAGKEDTLEDEEDK
FNFMLMECSICNEIVHPNCLKVCDASGVVNDELPNCWECPKCNHAGKSGKALKQKRGPGF
KYASNLPGSLLREQKPVTKEEGDASSATKRRSDKEETPRYRPEESLSRQPPVLSPSNLPR
PRPEDKLRRKRKLFDDDEEEDLSVRKKEKSDDPYFSKLLQQIKREEDDEDAEEEDEEGRE
SHFQSGVERKGRSGDPEDDGDYRDSKSDLLNPSLRTPVGDSDQSHCSSPQAGPSSEGGSE
TQEKGPRPKARRKRRLPNRELSRELSKALTQEIQKTEDCMANENRQPLKAEPETENEEPK
KLFRNGNELGDQRAHLKTKEMNGNSWELRHFYPSQITPLGFNRSTPTTRPVPPRSPPKCV
QMERHVIRPPPISPPPDRLPLKDGKAHIIQRELWMKIFRYLTHQELCVCMRVCKTWNRWC
CDKRLWTKIDLNRCTSVTPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRVLRL
SGCSWAAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRCKLRNVE
ELRLAGLDITDTSLRLISRQMPLLSRLDLSYCNHINDQSVNLLTAAGTTTRDSLTEINLS
VCNRVTDHSLNFFKRCGSICQIDLRFCKQVTKAACERFIAEMSVSVPFKLKEDKLLQKIS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggccttgtcactgagcggagacgatgaggaatatgattcagaatctgagcagcagcgg
gcagctaaccggcccaaacccaagatggggacgtcgtcagctgttaagctgccatccaac
cgcagctcctctggagcccgccgcaggaggacacgctgcagaaagtgtgaggcgtgcttg
cggtctgaatgcggggagtgtcacttctgtaaggacatgaagaagtttggtggaccaggg
cgcatgaagcagtcctgcatcatgagacagtgcatcgcgcccgtgttgccccacacagca
gtgtgtgtagtgtgcaaagaagccgggaaggaggacacactggaggatgaggaggacaag
tttaactttatgctgatggagtgctccatctgcaatgagatcgtgcatcccaactgcctg
aaggtgtgcgacgcttcaggggtggtgaatgatgaactccctaactgctgggaatgtcct
aaatgcaaccatgctggaaagagtggaaaagcattgaagcaaaaaaggggcccggggttc
aagtatgcctccaacctccctggctctttgctgagggaacagaagcctgtgacaaaggag
gagggggacgcttcttcagcgactaagaggaggtcagacaaagaggagacgcccaggtac
cgacccgaggagtctctcagccgccagccgccggtgctctcacccagcaacctgccacgg
ccccggcccgaggacaaactgaggagaaagaggaagctgtttgatgatgatgaggaagag
gatctcagtgtgaggaagaaggaaaagtcagatgatccttatttttccaaacttcttcaa
caaatcaagagagaagaggacgatgaagatgctgaagaagaggatgaagaaggaagggag
tctcatttccagagcggtgtagagaggaaagggcgttctggagaccctgaagatgatggg
gattacagggactcaaagagcgaccttttgaatcccagccttagaacacccgttggagac
agtgaccagtctcactgtagctctccacaggccggccccagcagcgagggcgggagcgag
acccaggaaaaaggcccgcgtccaaaggctcggcgtaagcggcgtttacctaacagagag
ctgagtcgggaactgagcaaagcacttacccaggaaatccagaagaccgaggactgcatg
gccaatgagaaccggcaaccgctgaaggctgaaccagagacggaaaacgaggaacccaag
aagctgttccgcaacggcaatgagcttggggatcagagggcccacctcaagaccaaagag
atgaatgggaactcctgggagctgcgacacttctacccaagtcagatcactccgctgggc
ttcaacaggagcactccgacaacccggccggttcctccgcgctctccacccaagtgtgtc
caaatggagcggcacgttattcgaccccctcccataagtccgcctcccgacagactgcct
ctaaaagatggaaaagcgcacatcatccagcgagagctctggatgaagatattccgctat
ctcacacaccaggagctgtgtgtgtgcatgagagtgtgcaagacgtggaacagatggtgt
tgtgacaagagactctggacaaagatagatctgaaccgctgcacctcagtcaccccactc
atgctaagtgggattatccgccgacagccagtctccctggacctcagctggaccaacatt
tccaagaaacaattaagctggcttattaacagactgccaggtctgcgagtgttaaggctg
tcggggtgctcctgggctgctgtgtctgcactctgcacctccagctgccctctgctgcgc
actctcgatgtgcagtgggtggagggactcaaagatgcacagatgagggacctcctctcc
cctcccacagataacagaccaggccagctggataaccgttgcaagttgcggaacgtggag
gaactgaggctggcagggctggacatcaccgacacgtctttacgcctcataagtcgacag
atgcctttgctctccaggctggaccttagttactgcaaccatatcaatgaccagtcggtc
aacctgttgacggcagcagggaccacaaccagagattccctcacagaaatcaacctctca
gtgtgtaacagagtcacggaccattccttaaacttcttcaagcgctgcggaagcatctgt
cagatagaccttcgcttctgcaagcaggtgaccaaggcagcctgtgaaaggttcatcgca
gagatgtctgtgagtgtaccgtttaaactgaaagaggacaaattgctgcagaagataagc
tag
DBGET
integrated database retrieval system
