Oryzias latipes (Japanese medaka): 100125501
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Entry
100125501 CDS
T02443
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100125501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
100125501
Membrane trafficking [BR:
ola04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100125501
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
EGF_CA
FXa_inhibition
Arylesterase
RVT_1
cEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
100125501
NCBI-ProteinID:
XP_023813620
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All DBs
Position
8:24698666..24723070
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AA seq
525 aa
AA seq
DB search
MFQRTRENLLKGTPLVVVYLDDILVNGKDEADHLKNLTELLGRLEEAGLWLNRTAKQCLA
SDFRCENGQCVSAFFVCDGDEDCDDGGDEVSCPPITXSSASFECNNSICVPPQWACDGXS
DCLDGSDEWPQSCHAEAPVTLASHQCHSMEFRCGSGECIHGSWKCDGDAGCLDGSDEAGC
TRSTCHPDEFECGDGTCIHGSCQCNQQKDCRDTTDESSCVNVTHCEGPDKFKCRSGECIT
MERVCDNKRDCRDWSDEPLRECGCSHICNDLKIGRECLCQCGYSLRDKRRCEDIDECASP
DTCSQTCINTMGSYKCECEEGXQVDPVTKACKSIGTIAYLFFTNRHXKMTLDKSEYTLVI
PRLKNVVALDIDVATKEIYWSDISLKKIYRRNXLKPERRGRWFHSLMFETSLDVPCRTNI
DSADDSAQHQTIIDSDVDAPEGIAYDWVHKNLYCTDGIRSTISVATADGSHRKTLFHQGL
SKPRAIVFDPHSNFLYWTDWGNPAKIEKGGLNGGDRSTLVTGFGS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgttccagaggacgagggaaaaccttttgaaaggtacaccattggtggtggtctactta
gatgacatcttggtgaatggcaaggatgaggcagaccacctaaaaaacttgactgagctg
ctgggcaggctggaggaagcaggactgtggctgaacagaactgccaaacagtgtttagcc
tcagacttccgctgcgagaatggccagtgcgtctcagccttctttgtgtgtgacggagat
gaggattgcgatgatgggggtgatgaggtctcctgccctcccatcacctgaagctctgca
tccttcgagtgcaacaacagcatctgcgtccctccccagtgggcctgcgacggttaaagc
gactgtcttgatggctctgatgagtggccccagagctgccacgccgaagcccccgtgacg
ctcgcctctcatcagtgccactcgatggagttccgctgtggcagcggagagtgcatccac
ggcagctggaagtgtgatggagatgctggctgcttggatggatctgatgaagctggctgc
actcgctccacctgccatccagatgagtttgaatgtggtgatggaacctgcatccacggc
agttgccagtgcaaccagcagaaggactgcagagacacgactgacgaatccagctgtgtc
aacgtgacccactgtgagggcccggacaagttcaagtgtcgcagtggggagtgcataacc
atggagagagtgtgtgacaacaaaagggactgcagggattggtcagatgagcctcttcgg
gaatgtggctgctctcacatttgcaatgacctgaaaatcggccgcgagtgcttgtgtcag
tgtggatatagcctcagagacaaaagacggtgcgaagatattgatgagtgcgccagtcca
gacacctgcagccagacctgcattaacacgatgggcagctacaaatgtgagtgtgaggag
ggttagcaggttgacccagtaaccaaagcgtgcaaatctattggtacaatagcctacctc
ttcttcaccaatcgtcacngaaagatgactcttgacaaaagcgagtacactctagtaatt
ccccgcctaaagaatgtggtggcgctggacattgacgtagccactaaagagatctactgg
tccgacatttctctgaagaaaatctacagacgaaactgactaaaaccagagcggagagga
cgttggtttcattccctgatgtttgaaaccagtttggatgttccatgcagaacaaacata
gactcagctgacgactctgctcagcaccaaaccatcatcgacagcgacgttgatgcccct
gaaggaatcgcctacgactgggtccataaaaacctctattgcactgacggtattcgtagc
actatctctgtggcaactgctgatggcagccatcgcaaaactcttttccaccaaggcttg
tcgaagcctcgggcgatagtgttcgacccccatagcaactttctatactggactgattgg
ggaaatccggctaagatcgagaagggaggtcttaatggaggagaccgctccactctggtc
acagggtttgggagttag
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