Onychostoma macrolepis: 131551927
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Entry
131551927 CDS
T09350
Symbol
slit1a
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 1a
KO
K06838
slit 1
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omc00536
]
131551927 (slit1a)
Glycosaminoglycan binding proteins [BR:
omc00536
]
Heparan sulfate / Heparin
Axon guidance molecules
131551927 (slit1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
hEGF
LRRCT
LRR_9
LRR_1
DL-JAG_EGF-like
EGF_3
Motif
Other DBs
NCBI-GeneID:
131551927
NCBI-ProteinID:
XP_058651162
LinkDB
All DBs
Position
13:complement(900805..971604)
Genome browser
AA seq
1526 aa
AA seq
DB search
MPARGGQSVGRLVEACIRILLLCKAATACPALCTCSGTTVDCHGLGLKTMPRNIPRTTER
LELNGNNLTRINRNDFSGLKYLRVLQLMENQIGTVERGAFDDMRELERLRLNRNQLHQLP
ELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRXLRGLEV
LTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCNVAWLSQWLRERPTIGLFTQCSAP
APLRGLNVAEIQKHEFSCSGQSEDAAGQSCSFVTGSCPAACTCSNNIVDCRGKGLTAIPA
NLPDSMAEIRLEQNSIKSIPAGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY
GNKITDLPKGVFDGLYTLQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTF
TSLRTIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCTSPRRLANKRIGQIKSKKF
RCSAKEQYVIPGTEDTRLSSDCNNDPVCPAKCRCESNVVDCSNLRLSRVPEHIPASTTEL
RLNNNEITAIEATGAFKTLSHLKKINLSNNKISEIEDGAFEGGSSVNELHLTANQLDSVH
SGMFRGLDGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTITPGAFDTLQSLST
LNLLANPFNCNCHLAWLSIWLRNRKIVTGNPRCQRPAFLKEIPLQDVALPDFRCQEDQEE
ASCAPPIQCPSECTCLETVVRCSNKHLRVLPKGIPRNVTELYLDGNQFSVVPKELSNFKN
LQLVDLSNNKISSLTNSSFANMSQLTTLILSYNALRCIPTLAFGGLQSLRLLSLHGNDIS
ELPDGIFNDAASLSHLAIGANPLYCDCRLRWLSDWVKTGYKEPGIARCAGPHGMEGKLLL
TTPAKRFECHGEADAAILAKCNPCMSKPCLNHGSCEADQTDGYRCRCSEGFKGKNCETPH
NTCVSEPCKNGGTCHMSAEEDEGFSCSCAAGFEGPTCDVDIDECKDNDCQNGATCIDGIN
NYTCLCSPFYTGEMCEDMEDMCASSRSPCKHQSTCFITVTGPKCICAPGYVGDDCSVNYD
DCKDHRCQNGAQCVDEVNGYSCVCPKGYSGQLCEVPSTPRSLCDLADCQNNAPCVERGGH
ALCQCLEGFGGPRCEKLVSVNFVDRDSYLLLSDLENWPQANITLQVSTAEDNGILLYNGD
NDHIAMELHEGHVKVSYDPGSQPSHAIYSTETINDGQFHTVELVTFDQMVNLSIDGGIPT
TMDSFGKVQPLRGEAPLYVGGMPVSVHPTAPRIWQIQNSSSFHGCIQNLYINNELQDFTK
TQMKPGVVPGCEPCRKIYCLHGICQPNTAIGPVCHCQPGWSGQHCDQPSANPCLGSKCVH
GRCIPMDMQSYRCECQEGFHGALCNQQEELFNPCRKLQCKHGHCQISDTGDAYCHCEVGY
SGELCDKESECHGEPVRDFYQVQRGYTICQTTRMVSWVECSGTCDTGSCCASQRMKRRKY
TFECSDGTSFSEEVEKTIKCGCVGCM
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgagaggaggacaatctgtaggcagactggtggaggcgtgtatccggatactg
ctgctgtgcaaggctgccacggcatgccctgcgctctgcacttgcagcggcaccacagtg
gactgccacgggctggggctcaaaaccatgcccaggaacataccccgaaccacagagagg
ctggaactgaatggaaacaatctcacacgcatcaacagaaatgacttttctggactcaag
tatcttcgagttttgcagctgatggagaaccagattgggaccgtggagcgcggcgcgttt
gatgacatgagagagctggagagactacgtctgaacagaaaccagcttcaccagcttcca
gagctcctgtttcagaagaacgcggctctgtccagactagacttgagtgagaacttcatc
caggcgattcctcgaaaggccttcagaggagcgacggacatcaagaaccttcagctagac
aagaatcacatcagctgcatcgaggacggagctttccgcnnactacgtggactcgaagtt
ttaaccctgaacaacaacaacatcagcagcatcccagtgtccagcttcaaccacatgccc
aagctcaggaccttccgtttacattccaacaacctgaactgcgactgcaatgtggcctgg
ttgtcgcagtggttgcgcgagcggccgaccatcggtctgttcacccagtgcagcgctccg
gctccgctacgaggacttaatgtagccgagatccagaaacacgaattcagctgttcaggt
cagtctgaagacgctgcaggtcagtcgtgtagttttgtcacgggctcgtgtccggctgcc
tgcacctgcagtaataatattgtggactgcagagggaaaggactgacggcgatcccggcc
aacctgcccgacagcatggcagagatacgactggaacaaaacagcatcaagtccatccct
gcaggagcgttttctccttataagaaactgcgcagaatagacctcagcaacaaccagatt
tctgagctcgctcctgacgccttccagggcctgcgctccctaaactcactggttctgtac
ggcaacaagatcaccgatctgcccaaaggagtgtttgacggactctacaccctccagctg
ctccttttgaatgcaaacaagatccactgtcttcgcgccaacacctttcaggacctgcag
aatctctccctgctttctttatatgacaacaaaatccaaacgctggccaagggcaccttc
acctcgctgcgcaccatccagacccttcatttggctcagaatcccttcatctgtgactgt
aatctgaagtggctggctgattacctgcgctccaaccccatcgagaccagcggcgcccgc
tgcaccagccctcgccggctcgccaacaaacgcatcggacagatcaagagcaagaagttc
cgctgctccgccaaagagcagtacgtcatcccaggaacggaggacaccaggctgagcagc
gactgtaataatgaccccgtctgtccagccaaatgccgctgcgagtccaatgtagtggac
tgctccaatctacggctgagccgcgtccctgagcacatcccagcatccaccactgaactg
cgtctcaacaataacgagatcacggcgatagaggccacaggtgctttcaagacgctttct
cacctgaagaaaataaacctgagcaacaataagatctcagagatcgaggacggggcattt
gagggagggtcttcggtcaacgagctgcacctgacggcgaaccagctggattcagtgcac
agcgggatgttcagaggactggacggcctgcgtatgctaatgctgcgcaacaatcgcatc
agctgcattcacaacaacagtttcacgggcttgcacaacgtccgtctgctgtcgctctac
gacaacacgctgaccaccatcacacccggagccttcgacacgctgcagagcctctcaacc
ctaaacctgttggccaacccgttcaactgtaactgccacctggcatggctgagcatctgg
ctgaggaaccgtaagatcgtgacgggaaacccgcgctgccagcggccggcgttcctcaaa
gagattcccctgcaggacgtggccttaccagacttccgctgccaggaggatcaagaggaa
gcgagctgcgcgccgcccatccagtgtccctcggagtgcacctgtctggagaccgtggtc
cgctgcagcaacaaacacctgcgcgtcttacccaaaggaatcccgcgcaacgtcaccgag
ctgtatctggatggaaaccagttcagcgtggtgccaaaggagctgtccaacttcaaaaac
ctgcagctagtagacctgagtaacaacaaaatcagctcgctgaccaactcttcgtttgcc
aacatgagtcagctgacgaccctgatcctgagctataacgctctgcgctgtatcccgact
ctggcgtttggaggtcttcagtcgctccgcttgctgtctctgcatggtaatgacatctct
gaattgcccgatgggatcttcaacgacgctgcatcgctgtcacatctggcgattggtgcg
aaccctttgtactgtgactgccgcctgcgctggctctccgactgggtgaaaactggctac
aaggagcctggcatcgcacgctgcgctggaccgcacggcatggagggaaaactactgctc
accacccctgccaagaggtttgagtgtcatggtgaagcggacgctgctatactagcgaag
tgtaacccgtgcatgtctaagccctgtctgaaccacggcagctgcgaggccgatcagacg
gatggctacaggtgtcgctgttcagagggttttaagggcaagaactgtgagacgccgcac
aacacttgcgtcagtgagccctgtaagaacggaggaacgtgccacatgtctgcagaagag
gatgaaggatttagctgttcatgtgctgcaggctttgaaggtcccacatgtgacgttgac
atagacgagtgtaaagacaacgactgtcaaaacggagcaacctgcatagacgggatcaac
aattacacctgtttatgttcccctttttacacaggggagatgtgtgaggatatggaggac
atgtgtgcttcttctcgcagtccctgcaaacaccagtccacctgcttcatcacagtcact
ggcccaaagtgtatatgcgcacctggttatgtcggtgacgactgcagtgtgaactatgac
gactgtaaggaccacaggtgtcagaatggggcacagtgtgtggacgaggttaacggatac
tcctgcgtttgtcccaagggctacagtggacagctttgtgaagtcccatctactccgcga
tctctctgcgacctggctgactgtcaaaacaatgccccctgtgtggagcgggggggtcat
gcactgtgccagtgcctggaagggtttggtggaccgcgctgtgaaaagttggtcagtgtc
aactttgtggatcgagactcctacctgctactgagtgacctggagaactggcctcaggct
aacatcacgcttcaggtgtccacagcagaagacaatggcattcttctgtacaatggggac
aatgaccacattgctatggagcttcatgaaggtcatgttaaagtcagctatgaccctggc
agtcagccaagtcatgcgatctacagtactgagaccatcaacgatggtcagttccacact
gtagaactggtgacctttgaccagatggtgaacctttccatagatggtggtatcccaaca
accatggacagctttggtaaagtgcagcccttgaggggagaagctccactatatgtggga
ggcatgccggtcagcgtccaccccacagctccccgaatctggcagatccaaaacagctcc
agttttcacggctgtattcagaacctttacatcaataatgagctacaagactttaccaaa
acccagatgaaacctggtgtggtgcctggatgtgagccctgccgaaagatatactgcctc
catggcatttgccaacccaacaccgctataggccccgtatgccactgccagcccggatgg
agtgggcaacactgcgaccagccttcggcgaacccctgtctgggcagcaagtgtgtccat
gggagatgtattccaatggacatgcagtcataccgctgtgaatgccaggagggttttcat
ggtgccctgtgcaaccagcaggaagagctcttcaatccatgcagaaagcttcaatgcaaa
catggtcactgtcagatatctgacacaggagatgcctactgtcattgtgaggtgggctac
agtggagagttatgtgacaaggagtccgagtgccacggggagccggtgcgggacttctac
caggtccagcgcggttacaccatctgtcagaccacacgcatggtgtcgtgggtggagtgc
agcggtacctgcgacaccggctcctgctgcgccagtcaaaggatgaagcgcaggaaatac
actttcgagtgcagcgatggcacatccttcagcgaggaggttgaaaagaccatcaagtgt
ggctgtgtggggtgcatgtag
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integrated database retrieval system
