Ochotona princeps (American pika): 101517029
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Entry
101517029 CDS
T07609
Symbol
NGEF
Name
(RefSeq) ephexin-1
KO
K07525
neuronal guanine nucleotide exchange factor
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101517029 (NGEF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101517029 (NGEF)
Membrane trafficking [BR:
opi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101517029 (NGEF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
PH
SH3_2
SH3_16
Motif
Other DBs
NCBI-GeneID:
101517029
NCBI-ProteinID:
XP_004576778
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All DBs
Position
7:complement(112887829..112919825)
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AA seq
619 aa
AA seq
DB search
MELLAAAFSAACAVDHDSSTSESDTRDSAAGHLPGSESSSTPGNGTTPEECPALADSPTT
LTEALQRIHPIPADSWRNLIEQIGLLYQEYRDKSTLQEIETRRQQDAEIQGNADGSPASE
GTPEEEEEEEEEDEEPASPPERRTLPQICLLSNPHSRFNLWQDLPEIRSSGVLEMLQPEE
IKLQEAMFELVTSEASYYKSLNLLVSHFMENERLKKILHPSEAHILFSNVLDVMAVSERF
LLELEHRMEESIVLSDVCDIVHRYAADPFSVYITYVSNQTYQERTYKQLLQEKAAFRELI
AQLELDPKCKGLPFSSFLILPFQRITRLKLLVQNILKRVEERSERESTALDAHRELELVV
KACNEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTLRTK
KLFQEIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQTLANVFILRLLEN
ADDREATYMLKASSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYMAQQPDEL
TLDLADILNVLDKTEDGWIFGERLHDQERGWFPSSMTEEILNPKIRSQNLKECFRVHKMD
DPQRSQNKDRRKLGSRNRQ
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctggcggccgccttcagcgctgcctgcgctgtggaccacgacagctccacc
tcggaaagcgacacgcgcgactcggctgcgggacacctgcccggcagcgagtcgtcctcc
acgcctggcaatggaaccacacccgaggagtgcccggccctggccgacagccccaccacg
ctcaccgaggccctgcagaggatccaccccatccctgccgattcctggagaaacctaatc
gagcaaatagggctcctgtatcaggaataccgggacaagtcgaccctgcaggaaatcgaa
acccggaggcagcaggatgcagagatacaaggcaatgctgacggctccccggccagtgag
ggcacccccgaggaggaagaggaggaggaagaggaggacgaggagcccgccagcccgccc
gagaggaggaccctgccccagatctgcctgctcagtaacccccactcacggttcaacctg
tggcaggacctgcccgagatccggagtagcggcgtgctggagatgctgcagccagaggag
atcaaactgcaggaggccatgttcgagctggttacctccgaggcctcctactacaaaagc
ctgaacctgctggtctcccacttcatggagaacgagcgactgaagaagatcctgcacccc
tctgaggcgcacatcctcttctccaatgtgctggacgtcatggccgtcagcgagcggttc
ctcctggaactagagcaccgtatggaggagagcatcgtgctgtcggatgtgtgcgacatt
gtgcaccgctacgccgccgaccccttctctgtctacataacctacgtcagcaaccaaacc
taccaggagagaacctacaagcagctgctgcaggagaaggccgcgttccgggagctgata
gcgcagctggagctggaccccaagtgcaaggggctgcccttctcctccttcctcatcctg
cccttccaaaggatcacgcgcctcaagctgctggtccagaatatcctgaagcgggtggag
gagcgctcagagcgggagtccacagccctggacgcccacagggaactggagctggtggtg
aaggcgtgtaacgagggtgtccggaagatgagccgcacggagcagatgatcagcatccag
aagaagatggagttcaagatcaagtccgtgcccatcatctcacactcgcgctggctgctg
aagcagggggagctgcagcagatgtcaggccccaagacctcccgcaccctgcggaccaag
aagctcttccaagaaatttacctcttcctcttcaacgacctgctggtcatctgccggcag
atcccaggagacaagtaccaggtatttgattcggccccgcgaggcctgctgcgggtggag
gagctggaagaccagggccagacgctagccaacgtgttcatcctgcggctgctggagaat
gccgacgaccgtgaggccacctacatgctgaaggcatcttcccagagcgagatgaagcgc
tggatgacctccctggcccccaacaggaggaccaagttcgtctccttcacgtcacggctg
ctggactgcccgcaggtccagtgtgtgcacccgtacatggcccagcagccggacgagctg
acgctggatctggctgacatcctaaacgtcctggacaagacggaagacgggtggatcttt
ggtgagcgtctgcacgaccaggagagaggctggttccccagctccatgactgaggagatt
ctgaaccccaagatccgctcccagaacctcaaggagtgcttccgagttcacaagatggac
gacccccagcgcagccagaataaggaccgcaggaagctgggcagccggaaccggcaatga
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