Ochotona princeps (American pika)
Genome info
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Genome information
Entry
T07609
Org code
opi
Name
Ochotona princeps (American pika)
Annotation
yes
Taxonomy
TAX:
9978
Lineage
Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Brite
KEGG organisms [BR:
br08601
]
KEGG organisms in the NCBI taxonomy [BR:
br08610
]
KEGG organisms in taxonomic ranks [BR:
br08611
]
KEGG organisms: animals [BR:
br08612
]
Data source
RefSeq Assembly:
GCF_014633375.1
(Chromosome)
BioProject:
666703
Chromosome
1 (RS:
NC_050536
)
2 (RS:
NC_050537
)
3 (RS:
NC_050538
)
4 (RS:
NC_050539
)
5 (RS:
NC_050540
)
6 (RS:
NC_050541
)
7 (RS:
NC_050542
)
8 (RS:
NC_050543
)
9 (RS:
NC_050544
)
10 (RS:
NC_050545
)
11 (RS:
NC_050546
)
12 (RS:
NC_050547
)
13 (RS:
NC_050548
)
14 (RS:
NC_050549
)
15 (RS:
NC_050550
)
16 (RS:
NC_050551
)
17 (RS:
NC_050552
)
18 (RS:
NC_050553
)
19 (RS:
NC_050554
)
20 (RS:
NC_050555
)
21 (RS:
NC_050556
)
22 (RS:
NC_050557
)
1A (RS:
NC_050558
)
1B (RS:
NC_050559
)
2A (RS:
NC_050560
)
3A (RS:
NC_050561
)
4A (RS:
NC_050562
)
7A (RS:
NC_050563
)
8A (RS:
NC_050564
)
9A (RS:
NC_050565
)
11A (RS:
NC_050566
)
13A (RS:
NC_050567
)
14A (RS:
NC_050568
)
MT (RS:
NC_005358
)
Statistics
Number of protein genes: 18885
Number of RNA genes: 1681
Created
2021
Reference
PMID:
34036348
Authors
Sjodin BMF, Galbreath KE, Lanier HC, Russello MA
Title
Chromosome-level reference genome assembly for the American pika (Ochotona princeps).
Journal
J Hered esab031 (2021)
DOI:
10.1093/jhered/esab031
Reference
PMID:
14660685
Authors
Reyes A, Gissi C, Catzeflis F, Nevo E, Pesole G, Saccone C
Title
Congruent mammalian trees from mitochondrial and nuclear genes using Bayesian methods.
Journal
Mol Biol Evol 21:397-403 (2004)
DOI:
10.1093/molbev/msh033
Ochotona princeps (American pika) Ochotona princeps (American pika)