Ochotona princeps (American pika): 101519839
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Entry
101519839 CDS
T07609
Symbol
RRP12
Name
(RefSeq) RRP12-like protein isoform X2
KO
K14794
ribosomal RNA-processing protein 12
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opi03009
]
101519839 (RRP12)
Ribosome biogenesis [BR:
opi03009
]
Eukaryotic type
90S particles
Other 90S particles
101519839 (RRP12)
Pre-60S particles
Other pre-60S particles
101519839 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Msb1-Mug8_dom
DUF6031
Motif
Other DBs
NCBI-GeneID:
101519839
NCBI-ProteinID:
XP_004580062
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Position
18:27290742..27317102
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AA seq
1232 aa
AA seq
DB search
MGRSGKLPSGVSSKLKRWKKGHSSDSNPTISRHRQAARSRFFSRPSGRSDLTVDAVKLHN
ELQSGSLRLGKRGAPETAMEEEAELAATERSSATFLSGLSDCTNVTFSKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALVLSCLATLLRKQNLEAWSYPVTLQVYHGL
LSFTVHPKPKIRKAAQHGVCSVLKGSEFMFGEKAPAHHPAAVSTAKFCIQEIEKSGGTKE
ATTTLHMLTLLKDLLACFPEGLVKSCSETLLRVMTLSHVLVTACAMQAFHSLFHAKPGPG
TLSAELNAQIITALYDYIPSENDLQPLLAWLKVMEQAHINLVRLQRDLGLGHLPRFFGTA
MTCLLSPHSQVVVAATQSLKELLKECVAPHMADIGSVTGSASGPAQYVAKMFRAAEEGLT
YKFHAAWSSVLQLLCVFFEACGKQAHPVMKKCLQSLCDLRLSPHFPHTAALNQAVGAAVT
SMGPEVVLQAVPLEIDGSEESLDFPRSWLLPVIRDHVRETRLGFFTSYFLPLATTLKSKA
VELAQAGSTVESKIYDTLQWQIWTLLPGFCTRPTDVASSFRGLARTLGMAISERPDLRVT
VCQALRTLITKGCEAEADRAEVSRFAKNFLPILFNLYGQPVADGDSPAPRRAVLETVKTY
LTITESQLVNGFLEKASEKVLDPTSSDFTRLSVLDLVVALAPHADEAAISKLYTTIRPYL
ESKAHGVQKKAYRVLEEICACRQGPGAHFVQSHLGDLKKTLLDSLRSTASPAKRPRLKCL
IHIVKQLSAEHEEFIAALVPEVILCTKEVSVGARKSAFALLVEMGHAFMRFGSNQEEALQ
RYLVLIYPGLVGAVTMVSCSILALTHLLFEFRGLLGTSTVQQLLQNVCLLLASRTRDVVK
SALGFIKVAVVVMDVAHMSKHVQLVLEAIGQLSDDMRRHFRTKLRNLFTKFIRKFGFELV
KGLLPEEYHRVLVNIRKAEARAKRHRALSQAAEEEEEDEEEEPAQGKGDSIEEILADSEE
EDNEEEERNRGKEQRKLARQRSRAWLKEGGGDEPLNFLDPKVAQRVLATQPGPERGKRKD
HGFKVSADGRLIIRDEEDSEKVEEEEGARGEDEEMADLLADAGVRNKKQKFKQQKEEEEE
ELEMPPQYQAGGSGIHRPVAKTAPGAEYKAKKAKGDVKKKGRLDPYAYIPLNRTKLNRRK
KVKLQGQFKGLVKAAQRGTQKGHKLRRKSHRP
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggccgctcggggaagctgccctccggggtctcttccaagttgaagcgctggaagaag
ggtcacagcagcgacagtaaccccaccatctctcgccaccggcaagcagcccgcagccgc
ttcttcagccggccctcaggtaggagcgacctgacggttgatgccgtgaagctgcacaat
gagctgcagtcgggctccctacgcctgggcaagagaggagccccggagacggccatggag
gaggaggccgagctggccgccaccgagaggtcctcggccaccttcctgagcggcctctcg
gactgcacgaacgtcaccttcagcaaggtgcagcgcttctgggagtccaactcggcggcc
cacaaggagatctgtgctgtgctggccgccgtcacggaggtgattcgttcccagggaggg
aaggagacagagacggagtactttgcagctctggtcctgtcctgtctggcaacccttctg
cggaagcaaaacctagaggcctggagctaccctgtgaccctccaggtgtaccatgggctt
ctgagtttcaccgtgcaccccaagcccaagatccggaaggctgcccagcatggcgtgtgc
tcggtcctcaagggcagtgagttcatgtttggtgaaaaggcccctgcccatcatcctgct
gccgtttccactgccaagttctgcatccaggagattgagaagtctggaggcaccaaggag
gccaccaccacgctgcacatgctgacgctgctgaaggacttgttggcctgcttcccagaa
ggcctggtgaagagctgcagtgagactctcctccgagtcatgaccttgagccatgtgctg
gtgactgcatgtgccatgcaggcattccacagcctcttccatgccaagccaggcccaggc
accctgtcggcggaactcaatgcccagatcatcacggccttgtatgactacattcctagt
gagaatgacttacagccgctgctggcctggcttaaggtcatggagcaagcccacatcaac
cttgtcaggttgcagcgggacctggggctgggccatctccctcgcttttttggaacggcc
atgacctgcctcctctccccacactcgcaggtggtggtagctgccacccagagtctcaag
gagctcctgaaggaatgtgtggctccccacatggctgatatcggctctgtgacaggctca
gcttcaggccccgcccagtatgtcgccaagatgttcagggcagcggaggagggcctgaca
tacaaatttcatgcggcttggagttctgtgttgcagctgttgtgtgtcttctttgaggcg
tgtggaaaacaggcccaccctgtgatgaagaagtgccttcagtccctgtgtgacctgcgc
ctctcccctcacttcccccacacggcagccctcaaccaggccgtgggggctgcggtgacc
agcatggggcccgaggtggtgttgcaggctgtacctctggagattgatggttctgaggag
agtctggattttccacggagctggctgttgcctgtcatccgggaccatgtgcgggaaaca
cggctgggcttcttcaccagctacttcttgcctctggccaccaccctgaagagtaaagcc
gtggaactagcccaggcaggcagcacagtggagtccaagatctacgacacactgcagtgg
cagatctggaccctcctgcctggcttctgcacgagacccacagatgtggcctcctccttc
cgagggcttgcgcgaacactaggcatggccatcagcgagcgcccagacctgagagtcacc
gtgtgccaggccctgcgcaccctcatcaccaagggctgtgaggctgaggccgaccgtgct
gaagtgagccgctttgccaagaactttctgccgatcctcttcaacctctacgggcaacct
gtggctgacggggacagcccagcccctcgccgagctgtgctggaaaccgtcaaaacatat
ctcaccatcaccgagtcccagttggtgaatgggttcctggagaaagccagtgagaaggta
cttgaccctaccagctctgacttcaccaggttgtctgtcctggacctggtcgtggccttg
gctcctcatgcagatgaagcagctatcagcaagctgtacaccaccatccggccctactta
gagagcaaggcacacggggtgcagaagaaggcctaccgtgtgctggaggagatatgtgcc
tgccgccagggcccgggggcccacttcgtgcagagccacctgggcgacctgaagaagact
ctgctggactcgctgcgcagcacggcctcccctgccaagcggccccgcctgaagtgcctc
atacatattgtgaagcagctgtcggccgagcatgaggagttcatcgctgcccttgtgccg
gaggtgatcctgtgcaccaaggaggtatctgtgggtgcgcgaaagagcgcctttgctctg
ctggtggagatgggccatgctttcatgcggtttggctccaaccaggaagaggccctgcag
cgctaccttgtcctcatctaccctggcctcgtgggcgcagtgaccatggtcagctgcagc
atcttggccctgacccacctcctctttgagtttagaggtctgctggggaccagcacggtg
cagcagctactacagaacgtgtgcttgctcctggcctcccgcacccgcgacgtggtcaag
tctgcgctgggcttcatcaaagtggctgtggtcgtcatggatgttgcacacatgtccaag
catgtgcagctggtgctggaggccatcgggcagctttccgatgacatgcggcggcacttc
cgcaccaagctccggaacctgttcaccaagttcatccgcaagtttgggtttgagctggtg
aaggggttgctgcctgaggagtaccacagagtcttggtcaatatcaggaaggctgaggcc
cgggccaagaggcaccgagccctgagccaggctgccgaggaggaggaagaagatgaggag
gaagagcctgcccagggcaaaggtgacagcatcgaggagattctggctgactcggaggaa
gaggacaacgaggaagaggaaagaaaccggggcaaggagcagcggaagctggcccggcag
aggagccgggcgtggctgaaggaaggtggtggggacgagcccctcaacttcctggatccc
aaggtggcccagcgagtcttagccacacaacctgggcccgaacgggggaagaggaaggac
catggcttcaaggtgagcgccgatggccgactcatcatcagggacgaggaggacagcgag
aaggtggaggaagaggagggtgccagaggggaggatgaagagatggctgacctgctggca
gatgcgggcgtcaggaataaaaagcagaagtttaagcagcagaaagaggaggaagaggaa
gagctggagatgccacctcaataccaagctggaggctctggcattcatcgccctgtggcc
aagactgcacccggggcagaatacaaggccaagaaggcaaaaggtgacgtgaagaagaaa
gggcggctcgacccctatgcctacatccccctcaacagaaccaagcttaaccgcaggaaa
aaggtgaagctgcagggacagttcaaaggcctggtgaaggctgcacagcgggggacacaa
aagggacacaaattgcgcaggaagagtcaccgaccctga
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