Ochotona princeps (American pika): 101523258
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Entry
101523258 CDS
T07609
Symbol
CDAN1
Name
(RefSeq) codanin-1
KO
K19531
codanin-1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101523258 (CDAN1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101523258 (CDAN1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
DUF5743
Motif
Other DBs
NCBI-GeneID:
101523258
NCBI-ProteinID:
XP_036351386
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Position
17:complement(56127071..56139330)
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AA seq
1243 aa
AA seq
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MAAVLESLLREEVSVAAAVRWLAHRAQSSESPGEAAVLSSLGPLRKEFVPFLLNFLREQS
SRVLPQGPPTPAKAPGASATLPGRPGGPPRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXRGSRGPGGPEEGVGGESVPWAGARRLRGSGSAASPSLPLWEPPNLSNLE
EFPPVGSVPPGPAGRTKPSRRINPTPVSQERSLSKPKTCFTSPPISCVPSSQPSALDTSP
WGLGLPPGCRSLQEEREMLRKERSKQLQQSPVPTCPTPESGSPLPSRLGSLSDEPADPSR
VSSHRRLELVAQVYSSCIAENLVPNLFLELFFVLQLLTTRRMVAAQDRDFEPNPSVLEPL
ESPLFQSVHDCVFFAVQVLEHQFPVLCCLDKGTLKLLAENERLLCFSPALQGRLRAAYEG
SVAKVSLVTLPSAQAVSFQPETDNRANFSSDRAFHTFKKQRDVFYEVLREWEDHHEEPGW
DFEKGLGTRIRAMMGQLSAACSHSHFVRLFQKQLLQMCQSPDGAGGTVLGETPDVLSMLG
ADKLGRLRRLQERLVAPQSSGGPCPPPTFPGCQGFFRDFILSASSFQFNQHLMDSLSLTI
RELNSLPLPPHEPSDEDGEADVDWQGERRQFAVVLLSLRLLAKFLGFVAFLPYRGPEPPP
TRELQDSILALRSQVPPVLDVRTLLWQGLRARRAVLTVPWLVEFLSFADHIVPLLDYYRS
IFSLLLHLHRSLVLAQERVGDMCFLNKLLLLAVLGWLFQIPTLPEDLFFSEEGQPDAFQV
DTVSSEYGLDSAPVVDQQLLYTCCPYIGELRKLLALWVSGSSGRSGGFIRKITPTTTTGL
GAQPLQSSQGLQAQLAQAFFHNQPPSLRRTVEFVAERIGSNCVKHIKATLVADLVRQAET
LLNDQLVAQGQEGGDAAQMVEILCSQLCPHGAQALTQGREFCQRKSPGAVRALLPEETPA
AVLSSAENIAVGLAIEKACTWLSANITALIRREVKAAVSRMLRAQGPEPAARGEQRGCSH
ACEHHAPLPSHLISEIKLHPSWILWPPQDVLSLAVGPRDPEEGVSPDHLEQLLGQLGQTL
RCRQFLCPPAEQHLAKCSVELASLLVADKIPILGPLAQHRLERGQARRLLHMLLCLWKDD
FQGPVPLRLLLSPRNVGLLADTRPREWDLLLFLLRELVERGLMCRTEIEACLDSLHDAQW
PGDFSEELATLFNLFLTEPHLPEPQLRACELVQPNRGTVLAQS
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgttttggagtcgctgctgcgcgaagaggtgtcggtcgcggcggccgtgcgg
tggctcgcgcacagagcccagagttctgagagccccggggaggcggccgtgctgagctca
ctcgggccgctgcggaaggaattcgtgccgttcctgctgaacttcctgagggagcagagc
agccgtgtcctcccgcagggtcctccaacccccgccaaggcgccgggcgcctcggcgacc
ttgccggggaggccggggggtccgccgcggggcggnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcggggcagccgcgggcccgggggcccg
gaggagggggtcggcggggagagcgtgccctgggccggggcccggaggctgcggggctct
ggcagtgccgccagtcccagcctgccgctctgggagccaccaaacctcagcaacctggag
gagttccctcccgtaggctcggttccccccggccccgcaggcaggacgaagccttcacgc
aggatcaacccaactccggtgagccaagagcggtcactctccaagcccaagacctgcttc
acctcaccccccatcagctgtgtccccagttcccaaccctcagccctggacactagccct
tggggccttggccttcccccggggtgcagaagtctgcaagaggagcgggagatgctcagg
aaggagcgctccaaacagctgcagcagtcacctgtccccacgtgtcccaccccagaatcc
gggtctcctctccccagccggctgggaagcctctcagatgagcccgctgaccccagccga
gtgtcctcccaccgccgcctggagttggtggcccaggtgtattcttcgtgcattgctgaa
aacctggtcccaaacctcttcttggagcttttcttcgtccttcagctcctcaccacccgg
agaatggtggctgcccaggacagagattttgaaccaaacccaagtgtcttagagcccctg
gagagccccctcttccagagcgtccatgactgcgtcttctttgcagtgcaagtgttggag
catcagtttccggtcctctgctgcctggataaagggaccttgaagctgctggcggagaac
gagcggctgctgtgcttctccccagctctgcaaggccgcctccgggccgcctatgagggc
agtgttgctaaggtgtctctggtgacgctgccctcggcccaggctgtctcttttcaacca
gaaactgacaatcgtgccaacttctccagtgaccgagcctttcatacgtttaaaaagcag
agggacgtgttttatgaggtgcttcgagagtgggaggatcaccatgaggagcccggctgg
gattttgagaagggcttgggtaccaggatcagagccatgatgggtcagctctccgcggcc
tgcagccatagccactttgttcgacttttccaaaaacagcttctccagatgtgtcagagc
ccagatggagctgggggcactgtcttgggcgaaaccccagatgtgctgagtatgctggga
gcagacaagctagggcggttgaggcgccttcaggagcggcttgtggcccctcagagcagc
ggggggccctgtccaccccccaccttccctggttgtcaaggcttcttcagggacttcatc
ctgagtgccagcagcttccaatttaatcagcatctcatggacagtctaagcttgacgatc
cgggagctcaacagcctccccctgcctccacacgagcccagtgatgaggatggggaggca
gatgtcgactggcagggggaacggagacaatttgctgtggtgctactgagcctgaggctt
ttagccaaattcctggggtttgtggccttcctgccataccgtgggcctgaaccaccccca
acccgtgaacttcaggactctattctggccctgaggagccaggtcccaccagtcctagat
gtgcgaacattgctgtggcaggggctgcgggcccgccgggctgtgctcacagtgccctgg
ctggtggagttcctgtccttcgctgaccacatcgtccccttgctggactactaccggagc
atcttcagtctcctgctgcacctgcatcggagcttggtcttggcacaggagcgtgtaggg
gacatgtgcttcctcaacaaactgctgctgcttgccgtcctgggctggcttttccagatc
cccaccctccccgaggacttgttcttttcagaagagggccagccagatgcctttcaggtg
gacacagtgtcctcagaatatggcttggacagtgcacccgtggtggatcagcagctcctc
tacacctgctgcccctacatcggagaactacggaaactgctcgcactgtgggtttcaggc
agcagtgggcggagtggaggtttcatcaggaagatcacccccaccaccaccacggggctg
ggagcccagcctctccagagtagccaggggctgcaggcacagctcgcccaggcctttttc
cacaaccagccgccctccctgcgcaggactgtggagtttgtggcagagaggatcggctca
aactgcgttaaacacatcaaggccacactggtagcagatctggtacgacaagctgagacg
cttctcaatgatcagctggtggcacagggccaggaagggggtgatgcagcccagatggtg
gagatcttgtgttcccagctgtgcccacatggggcccaggcactgacccaggggcgggag
ttctgccagaggaagagccccggggccgtgcgggcactgcttcctgaggagaccccagca
gctgtgctgagcagtgcagagaacattgctgtggggttggccatcgagaaagcctgcact
tggttgtcagccaacatcacagcgctgattaggcgggaggtgaaagctgccgtgagtcgc
atgcttcgagcccagggtcctgagccagctgcccggggggagcagaggggctgctcccac
gcctgtgagcaccacgctcccctcccctcccacctcatctccgagatcaaactccacccc
tcctggatcctctggcccccacaggatgtgctctcgctggctgtggggccccgggaccct
gaggagggcgtttccccagaccatctggaacagctcctaggccaactgggccagaccctg
cggtgccgccagttcctgtgcccacctgctgagcagcatctggcaaagtgctcggtagag
ctggcttcccttcttgttgcagataaaatccccatcctagggccgctggcacagcacagg
ctggagagagggcaggcccggcggcttctgcacatgctgctctgcctgtggaaggacgac
ttccaggggccagtacccctgcggctactgctgagccccagaaatgtggggcttttggca
gacaccaggccaagggagtgggatctgctgcttttcttgctacgggagctggtggagagg
ggtctgatgtgccggacagagatagaagcctgcttggacagccttcatgatgcccaatgg
ccaggggacttctctgaagaattagcgaccctatttaatctgtttctaactgagccccat
ttgccagagccccagctacgagcgtgtgagttggtgcagccaaaccgggggactgtgctg
gcccagagctag
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