Oryza sativa japonica (Japanese rice) (RefSeq): 4324714
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Entry
4324714 CDS
T01015
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
osa03016
]
4324714
Enzymes [BR:
osa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
4324714
Transfer RNA biogenesis [BR:
osa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
4324714
Prokaryotic type
4324714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
4324714
NCBI-ProteinID:
XP_015636549
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All DBs
Position
1:complement(32660437..32667425)
Genome browser
AA seq
719 aa
AA seq
DB search
MRGRHLLSPLLSPLAYPKPPSSRLAPRRVASHRTVAPPPAARRAPLSEPDVGISLFASAL
PGFRGALKQRYSDFVVHEVALDGSLVRLTSFDLPDGECVDAKEGGMDEAQALESFRLLCG
DADCEALRGFLERVSEGGDSDVSPIILSADADKTHRSEVHDFFKRNFEALLTDTVEHSDG
IQRCIRVRLKPGRRERRDVDGRGRNRKGTGSSGWRDDKPFDSRGSIIWPDHLGKFIRFHL
YKENKDTQEALGKIGKMLGLQPRSFGFAGTKDKRAVTTQQVTVFKVQASRLVALNSKLIG
IKVGDFSYVKEGLALGQLMGNRFTITLRSVVTESEDVIKAALDGLITNGFINYYGLQRFG
SGSVPNHQVGVALLRGEWRNAVQLILGPREGECDNINKVREHFKEYGDIGTALRNFPRYL
ITERAILQRLKKYPGNYLQALMAIPRTLRLMYVHSYQSYLWNHAASMRVQKYGISRVVEG
DLVYKKEAPFEQGALKATSEDDGQTMSSEMNACCETLPEEMIQSVKIADSEDLSKSLYTF
EDVVLPLPGSETLFPGNEVAGIYHEIAMKDGINLRESVHGVEDFSITRMKGGYRRVIQRP
IDFEWDLITYTDEKIPLVETDLDVLSKTKPLEVNELLSDGISSCTSHDSGLEASLDASES
INGASLVVAEAKSIGSSDMLEKLAIKLAFTLPASSYATMAIRELMKTSTSVAHQKTLNI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggccgccatctcctaagccctctcttatcccctctcgcctacccaaaacccccc
tcctctcgcctcgctccccgccgcgtcgccagccaccgcaccgtagccccgccgcccgcc
gcgcgccgcgccccactgtccgagcccgacgtcggcatctccctcttcgcctccgccctc
ccgggcttccgcggcgccctcaagcagcgctactccgacttcgtcgtccacgaggtcgcc
ctcgacggctccctcgtccgcctcacctccttcgacctccccgacggcgagtgtgtagat
gcgaaggaaggcggcatggacgaagcacaggcgctggaatcgttccggctgctctgcggc
gacgcggactgtgaggcattgagggggtttctggagagggtttcagagggaggcgacagc
gatgtctcaccgatcattctctctgctgatgccgacaagactcatcgctcggaagttcat
gatttcttcaagaggaacttcgaggccttgcttacagatacagttgagcacagcgatgga
atccagaggtgcatcagggtgaggttgaagccggggcgacgcgaacggagggatgttgat
gggagggggaggaataggaaaggcacgggaagttcgggctggagagatgacaagccattt
gatagtagaggatctataatctggcctgaccatctagggaagttcataaggtttcatctt
tacaaggagaacaaggacacccaagaggcactaggaaagataggcaagatgctagggctt
cagcctcgatcattcgggtttgcaggaacaaaggataaacgcgctgttacaactcaacag
gtcacggttttcaaggtgcaagctagtaggttggttgctcttaacagtaagctcattggc
attaaagttggagacttcagttatgtgaaggaaggtcttgctcttggtcaactgatgggg
aaccgatttacaattaccttgaggagtgttgttacagagtctgaagatgtgattaaggct
gctcttgatggattaataacaaatggatttatcaattattatggtctacaacgctttggt
agtggttcagtgccgaatcaccaagttggtgttgctttgcttagaggagagtggagaaat
gctgttcaattgattcttggtccaagggaaggagaatgtgataacataaataaagtgagg
gagcattttaaggaatatggtgacattggcacggcacttaggaacttccctcgatatctc
ataacagagagggctatccttcagcgcttgaagaagtaccctggcaactatctacaagca
ctaatggctatacctagaacactgagactgatgtatgtgcatagttaccagagttactta
tggaaccatgctgcaagtatgagagttcaaaagtatggtatttcacgagttgtagaaggt
gacttggtttacaaaaaggaagccccttttgaacaaggagctttaaaggctacttcagaa
gatgacggtcaaactatgtcatctgaaatgaacgcatgttgtgaaacgcttccagaagaa
atgatccagtctgtcaagatagcggattctgaagatttatcaaagtccctgtacacattt
gaggatgtagtcctccctttgcctggttcagaaacattgtttcctgggaacgaagttgct
ggaatttatcatgaaatagctatgaaggatggcattaatctaagagagagtgtccatggt
gtcgaggacttctctattacaaggatgaaaggaggttatcgtcgggtgatccagcgacct
attgattttgaatgggatctcatcacttatacagatgagaaaatacctttagtagaaacg
gatttagatgttttgtctaaaacgaagccattagaagtaaatgaactactatcagatggg
atttccagctgtacatcacatgattctgggctggaagcttcattggatgcctctgaatca
ataaatggagctagcctagtagtagcagaagccaaatctattggcagctcggatatgttg
gagaaactggccataaaattagcatttactctaccagcatcatcttatgctacaatggct
attagggagttgatgaagacttcaacttcggttgctcatcagaaaacattaaacatctga
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