Oryza sativa japonica (Japanese rice) (RefSeq): 4331918
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Entry
4331918 CDS
T01015
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 26
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
osa01002
]
4331918
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4331918
Enzymes [BR:
osa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
4331918
Peptidases and inhibitors [BR:
osa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
4331918
Ubiquitin system [BR:
osa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
4331918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
UCH_1
ubiquitin
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
4331918
NCBI-ProteinID:
XP_015630856
LinkDB
All DBs
Position
3:4836134..4844303
Genome browser
AA seq
1069 aa
AA seq
DB search
MSRPNTRNKSKRPRADDCESPSAVFKKIHSTGAITKGDIKQLYMVWKPVCHGCHGNSKDS
PNCFCGLIPAANGVRKSGLWQRTNEIIRALGPNPSTDLRDSTETPAGLTNLGATCYANSI
LQCLYMNTSFRLGIFSLEPDILKMHPVLDQLARLFAQLHSSKMAFIDSAPFIKTLELDNG
VQQDSHEFLTLFLSLLEGSLSHSKVPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKME
DFYELELNIKGLNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNF
QLKRYVFLPKTTTKKKISSAFSFPGQLDMGKRLSNPSSSYTYGLSAILIHKGSAANSGHY
VAHVKDESNGQWWEFDDEHVSKLGLHPFGEKPGKSSDKTDQKPQGSSTADSVTNDDNNSC
HEAAFTSTMEEMFSSTDAYMLMYKRIAKDENGIESNNISSNNSLPHHFVDEIDERNTSYV
KECEEYESKKDVHLAYITERRQEVKSVLTEAPATPEEDSYFWISTDWLRQWADNVNPPSS
IDNSPIQCEHGKVPASKVTSMKRLSAGAWHKLFSKYGGGPTLSSDDFCMECLKDGAKNSV
SADVYRDRKASLRSIAEAALAGNNPDGPLYFVSRPWLTQWLRRKNVDIPSDADSGPTIAL
TCTHGNLLPEHASGAKRVTVPEDLWLFLYETSGMKIDDIVTFPSDSQPCGICSQQLSVVA
SVEDNLRAVKLKQRQSHEKLTSGKSLALHPGQKYYLVPSSWLSEWRAYITATGKNISSLP
EPQSLEVTINSLICEKHSRLLQRPLDLVCKRGTITQKASNTDGLTMISESDWILFSEEWN
VAHGKGLCAEIVFSKSSQDNLQSSEAVPILVEDLDQSTNDLSNDLGGREPYVRTDPEVCE
ECIGEKESCALVEKLNYQNEDIQVYLVRGKEAPKSIREASAAVPVPDRRTSKRSRRTTSG
NSISLKVSGSTTVYQLKLMIWESLGIVKENQELHKGSVEIEDDFATLADKCIFPGDVLWV
KDSEIYENRDIADEISEQKVVVQTEEGFRGTLLTSSASAQLCQDISFSD
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggccaaacacacgaaataagagcaagaggccgcgggctgatgactgcgagagc
ccgtctgctgttttcaagaagatacattccactggagcaatcacaaaaggcgatattaaa
caactttatatggtgtggaaacctgtttgtcatggttgccatgggaactccaaggactca
cccaattgtttctgcgggttgatccctgctgctaatggggtgaggaaatctggcctgtgg
cagagaacaaacgagatcattcgcgcccttggtcctaacccgtcgacggatcttcgtgac
tccactgagacgcctgctggattgactaacctgggcgctacctgttatgcaaacagcata
ctgcagtgcctttacatgaacacctccttccgcttgggcattttctctctagagcccgac
atcttgaagatgcaccctgtgctggatcagcttgctcggttattcgctcagctacactcc
agcaaaatggctttcattgattcggcaccttttataaaaaccttggaattagataatggt
gtccagcaggacagccatgaattcctcacattatttttgtctttgctcgagggttcacta
agtcattccaaggttccaggggctagaaccattgtgcagcatttgttccgtggaagtgtg
tcccatgttactcggtgctcatcatgtggaagggattccgaagcatcttcaaagatggaa
gacttttacgaactggagcttaacattaaaggtttaaataatctagaacaaagtttggat
gactatttgagtactgaggcactggatggagagaaccagtacttctgtgagtcatgtcag
aaaagggtagatgccactcgttgcataaaacttcgctcacttcctcctgttgttaatttt
cagctgaaacgctatgtattcctcccaaagacaacaacaaagaaaaagatttcttcggca
ttcagtttcccaggacagctagatatggggaagcggttatccaatccttcatctagttat
acgtatggcctgtctgctattttgatccacaagggtagtgctgccaatagtgggcactat
gtagcacatgtaaaggacgaaagcaatggtcaatggtgggagtttgatgatgagcatgta
tccaagcttggtcttcatccctttggtgaaaaaccaggcaaatcatccgataaaactgat
cagaaaccccagggtagttctacagcggattctgttacgaatgatgacaacaatagctgt
catgaggctgcattcacttctactatggaagagatgttttcttctacagatgcttatatg
ctgatgtacaaacgcattgctaaggatgagaatggtatcgaaagcaataatataagcagt
aacaattcgctcccacaccattttgtggatgaaattgatgaacgtaatacatcatatgta
aaggaatgtgaagaatacgaaagcaagaaagacgtccatttggcatatataacagagagg
cgccaagaagtaaaatctgttctgacagaagcgcctgcaactccagaggaggattcttat
ttttggatttcaacagattggcttcgccaatgggcggacaacgttaatcctccctcctct
attgacaacagtccgattcaatgtgaacatggaaaagttccagcgtcaaaagttacatcc
atgaaacgactatcagctggagcttggcataagctattttctaaatatggaggggggcca
acattgagcagtgatgatttttgcatggagtgccttaaggatggagcaaaaaattcagta
tctgcagatgtttatcgtgatcggaaggcatcattaagaagtattgcagaagcagcgctt
gctggaaataatccagatggtcctttgtactttgtttccaggccatggttgacccaatgg
ttgcgcagaaaaaatgtggatatcccttcagatgctgacagtggaccaacaattgctcta
acgtgcacccatggaaatcttcttccggaacatgcttcaggcgcaaagcgggtcactgtg
ccagaggacctatggttatttctctatgaaaccagtggaatgaagattgatgatattgtg
acttttccgtcagatagtcaaccatgcggaatttgtagccagcaattatcagttgttgct
tctgttgaggataatcttagagcagtgaaactcaagcaacgacaaagccatgaaaagtta
acttctgggaaaagtcttgcacttcatcctgggcaaaaatattatttagttccttcctca
tggttgtcagagtggagagcttacattacagcgactgggaaaaatatttcttcgttacca
gaacctcaatctcttgaagttaccatcaattcactaatctgtgaaaagcattcaagattg
ttgcaaaggcccttggatctagtttgcaagcgtgggactatcactcagaaagcatcaaat
actgatggattaacaatgatatcagaatctgattggattttattctctgaagagtggaat
gtagcacatggaaaaggtttatgtgctgaaattgtttttagcaagagctctcaagataac
ctgcagtcatctgaagcagtgccaattttggttgaagatctggaccagtcaacaaatgat
ttaagcaatgacttggggggcagagaaccctatgtcagaactgatcctgaggtttgtgaa
gaatgtattggagaaaaagagagctgtgcattggttgagaagctcaattatcagaatgaa
gatatccaggtttatcttgtccgtggtaaagaagcgccaaagtcaattagagaggcatcg
gcagctgttcctgtaccagatcgtaggacttcaaagcgttcccggagaacaacctcagga
aattcgatcagtttgaaagtctctggttctacaaccgtatatcagttgaaactcatgata
tgggaatctttagggattgttaaggagaaccaggagcttcacaaaggctctgttgagatt
gaagatgattttgctactcttgctgacaagtgtatttttcctggagatgttctatgggtt
aaagattccgaaatctacgagaaccgtgacatagcagatgaaatttcggagcagaaggtt
gtagtacagactgaggaaggctttcgtgggactctgttgacatctagtgcttcagctcag
ctttgccaggatatatcatttagcgattga
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