Oryza sativa japonica (Japanese rice) (RefSeq): 4352733
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Entry
4352733 CDS
T01015
Name
(RefSeq) protein ROOT HAIR DEFECTIVE 3 homolog 1
KO
K22698
protein SEY1 [EC:3.6.5.-]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4352733
Membrane trafficking [BR:
osa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
4352733
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sey1_3HB
RHD3_GTPase
GBP
Dynamin_N
MMR_HSR1
AAA_14
AAA_28
VapE-like_dom
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
4352733
NCBI-ProteinID:
XP_015618224
UniProt:
Q2QMH2
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Position
12:25508545..25516973
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AA seq
854 aa
AA seq
DB search
MDEAAAAEAVQLIDGEGEFAADSAERFMAAAGVAGCGLSYAVVSIMGPQSSGKSTLLNQL
FGTNFREMDAFRGRSQTTKGIWIARCVGVEPCTVVMDLEGTDGRERGEDDTAFEKQSSLF
ALAISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLEH
LEPVLREDIQKIWNSVAKPEAHKDTPISEFFNVQVTALPSFEEKEEQFREQVQQLRQRFS
NSIAPGGLAGDRRGVVPASGFLFSSQQIWKVIRENKDLDLPAHKVMVATVRCDEIAHEKF
SCLTSDAEWMELESDVQSGPVPGFGKKLGYIVDVHMQEYDKEAIYFDEAVRTAKRQLLKS
RVLNLVQPAFQKMLAHLRTRALEKYKTELNLTLESGKGFAAAVRDTTESNLNEFDQGCAD
AVIEQADWDYSKILEKVRRDVEDHTLSIREGKLSELTNHAKEKLRKALVEPVESLFDAAG
PSTWASIRNLFKRETEAILPEFQKNLAGFEMESATSEGMVSKLRDYARSIVENKAKEEAG
KVLIHMKERFTTVFSHDKDSIPRVWTGKEDVRAIAKDARSAALKLLSVLAAIRWDEKPDK
IEKILTSTLLDGSVTPKSKGASASSDPLASTTWEEVSPKYTLITPSQCKSLWKQFKAETE
FAITQAVSTQQAHKRGNGRLPPPWAMVAIAVLGFNEIMTLLRNPIYLFLLFVGYLLVKAL
AVQLDINREFQNGVVPGIISVTAKLIPTLQNILNKVATEQQQQQGHHQDAAAEAPQQQQQ
PQPQPPPLLLSPRSPMSELRRPLHMPFSPVRKAVSPSPSSSSSTVTSPRNAGEDQKPRQM
VQPDNESNNAYSIV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagcggcggcggcggaggcggtgcagctgatcgacggcgagggggagttcgcg
gccgactccgcggagcgcttcatggcggccgcgggcgtcgccggctgcggcctctcctac
gccgtcgtctccatcatgggaccccagagcagcggaaagagtacgttgctgaaccaactc
tttggaactaattttagggagatggatgcgttcaggggaaggagtcaaactaccaaaggt
atctggatagcacgatgtgttggtgttgagccgtgtactgttgtgatggatttggagggt
actgatggaagagaaagaggagaggacgacactgcatttgagaagcaaagttcgttgttt
gctcttgcaatttcagacatagttctaattaacatgtggtgccatgatattggccgggaa
caagctgccaataagcctcttctaaaaacagtatttcaggtcatgatgcgtttgttcagt
ccccgaaagacaacactattatttgttatacgtgataaaaccaggactccacttgagcat
ctagaaccagttctgagggaggatattcaaaagatatggaactctgttgctaagccagag
gcgcacaaagacacccctatcagtgaatttttcaatgtgcaagtcactgcattgcccagt
tttgaagaaaaagaagaacaattcagagagcaggttcaacaacttaggcagagattttca
aattcaattgcaccaggaggtcttgcaggtgatagaagaggagtggttcctgcttcagga
tttttgtttagttcacaacagatttggaaagttatacgagagaataaggatcttgaccta
cctgctcacaaggtaatggttgctacagttcgatgtgatgaaattgcacacgaaaagttt
tcctgcctaacctcagatgcagaatggatggaattggagagtgatgtgcagtcaggtcca
gtacctggttttggaaaaaaacttggctatattgtggacgtccacatgcaagagtatgac
aaagaagccatctatttcgatgaagctgttaggacagcaaaacgacaactgctgaaatcc
agagtactgaatcttgtccaacccgcattccagaaaatgttggctcacctgcgtacgagg
gctcttgaaaaatataaaactgaacttaatcttactttggagagtggaaaaggttttgca
gcagctgttcgagacactactgaatccaatctcaacgaatttgatcaagggtgtgcagat
gctgtaatcgagcaggcagactgggactactctaaaatactagagaaggttcggcgcgat
gttgaagaccacacactttcaattcgtgaaggcaagctatcagaattgacaaatcatgct
aaggagaaactaagaaaagcactagttgaacctgtagagtctcttttcgatgctgcaggc
ccttcaacctgggcatcaataagaaacctttttaaacgagaaacggaggctatcctgcca
gagtttcagaaaaaccttgctgggtttgaaatggaaagtgcaacgtcagaaggaatggta
tcaaaattaagggattatgccagaagtatcgtagaaaataaagctaaagaagaagctggc
aaagttttgattcatatgaaggagaggtttacaacggttttcagtcatgacaaggattca
attccgagggtctggacagggaaggaagatgtccgtgcaatagcaaaggatgctcgatct
gctgctctcaaacttctttctgtattggctgccattcgctgggatgagaaaccggataag
atcgaaaaaatcctcacttccacactcctagatggttctgttacaccgaagtcgaagggt
gcaagtgcttctagtgatccacttgcttcaactacttgggaagaagtttctccaaagtat
accctcatcactccttctcaatgcaagtcactgtggaagcagttcaaagcagaaactgag
ttcgccattacacaagcggtttccacgcagcaagctcacaagcgcggcaatggtaggctg
cctcctccttgggccatggtggcaattgcagttcttgggtttaatgagatcatgacgctt
cttaggaatcccatatatctattcttgctatttgtgggttatttgctggtcaaagcttta
gcagtgcagctagatatcaacagagaattccaaaatggcgtggttcctgggatcatctct
gttacagcaaaactaatccccacactacagaacattctaaacaaagttgcaacagagcaa
caacaacagcaagggcatcaccaagatgctgctgcagaagctccacagcaacagcagcaa
ccacagccgcagccacctcctctactcctgagccccagaagcccaatgagcgaactgcgg
aggccgctgcacatgccattcagcccggtgcgcaaggcggtatcgccttcgccatcctca
tcgtcttccaccgttacatcgcccaggaacgctggtgaagaccagaagcccaggcaaatg
gtacagcctgacaacgaatccaacaatgcttactctatagtttga
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