Oncorhynchus tshawytscha (Chinook salmon): 112221984
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Entry
112221984 CDS
T05605
Symbol
itchb
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
otw04144
Endocytosis
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112221984 (itchb)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112221984 (itchb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112221984 (itchb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112221984 (itchb)
04121 Ubiquitin system [BR:
otw04121
]
112221984 (itchb)
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112221984 (itchb)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
112221984 (itchb)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
HECT type E3
112221984 (itchb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
112221984
NCBI-ProteinID:
XP_024240249
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All DBs
Position
LG22:complement(18190717..18213284)
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AA seq
886 aa
AA seq
DB search
MASSVAKPGPGNGYPMKAQLQIMVLSAKLKENRKNWFGPSPYVEVAVDGQSKKTEKCNNT
HSPKWKQPLTVIVTPFSKLIFRVWSHQTLKSDILLGMAALEVSDTLKANDMKISEVVQTL
QLSADRDQTDVVGDLSVCLDGMQVDPEMFASAAEANTQSTSNGESQQNGDDVKWSRDSSP
SVDGLEHRASPNGCAVAVNGTGSCKGSPALSAGGSRGNPLRPPRPSRPPPPTPRRPTSSP
AASSNGSIPTEESDGPSSDTPVSTPAPAVPDPNAPPPTHDQSQAIAASQADSVTPGPPRA
PAVAAGPLPPGWEQRVDQNGRLYFVDHVEKRTAWERPEPLPSGWERRVDPMGRVYFVDHI
TRTTTWQRPTMETVRNYEQWQHQRNQLQGAMQQFNQRFIFGVNGLQDQVPATENKQFDPL
GPLPHGWEKRTDSNGRVYFVQHTTRTTQWEDPRTQGLLNEKPLPEGWEMRFTVDGIPYFV
DHNRRATTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKITVTRKTL
FEDSFQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGK
DNYCLQINPASYINPDHLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRMLNKPWALKDL
ESIDPEFYNSLIWIKENDIEECGLEMYFSVDKEILGEITTHELKPDGGEVLVTEENKEEY
IRLVAEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLADWQRNT
IYRHYARSSKQVLWFWQLIKEMDNEKRMRLLQFVTGTCRLPVGGFADLLGSNGPQKFCIE
KVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagcgttgctaaaccaggccctgggaatggctaccccatgaaggcacaactg
caaattatggtgctgtcagcaaaactgaaagaaaacaggaagaattggtttggccccagt
ccatatgttgaagtggccgttgatggacagtccaaaaagacagagaaatgcaacaacacc
cacagtcccaaatggaagcagccgctcacagtaattgtcactccttttagcaagctaatc
ttccgagtatggagtcaccagaccttgaagtcggacatattgttaggcatggcagctctc
gaggtcagcgacacactcaaagccaacgacatgaaaatctctgaggtggtgcagacgctg
cagctgagtgcagacagagaccagaccgatgtcgtgggggacctgtctgtctgtctggat
ggcatgcaagtggacccagagatgtttgcgtctgctgctgaggctaacacacaaagtaca
tcgaatggggaatcgcaacaaaacggggatgatgtgaagtggagtagagacagctctcct
tctgtggatggtttggagcacagagcttctccaaatggttgtgcggtcgcagtgaatggc
acagggtcttgcaaagggtctcccgctctgtcagcagggggctccaggggtaatcctcta
cgcccccccaggccctcccgaccccctccacccaccccgcgcagaccaacctcctctcca
gcagcatcctctaatggatccattccaactgaagaaagcgatggccccagctcagatacc
ccagtcagtacacctgcacctgcagtaccagaccccaacgccccaccccctacacacgac
cagagccaagcaatagcagccagccaagcagacagtgtaaccccaggcccccccagagcc
cccgctgtcgccgcaggcccattgcctcctggatgggagcagagggtggatcagaacgga
aggctgtatttcgtagatcatgtggaaaagaggacggcgtgggagcggcctgagcctcta
ccttctgggtgggagcggcgagtggaccccatgggcagggtctactttgtagaccacatc
accagaactaccacatggcaacggcccactatggagacggtgcggaactatgaacagtgg
cagcaccaacgcaaccagctacagggtgccatgcagcagttcaaccagcgcttcatattt
ggagtgaatgggctccaggatcaggttccagccactgagaataagcagtttgatcccctg
ggcccgctgccacatggatgggagaaaagaactgacagcaacgggagagtgtactttgtc
caacacaccacacggactacacagtgggaggaccctcgcactcaggggctgctgaatgag
aagcctcttccagagggctgggagatgaggtttacagtcgacggcatcccatactttgtg
gaccacaacaggagagccactacgtacatcgaccctcgtactggaaaatcttcacttgaa
aatggaccccagataacttatgttcgagactttaaagccaaagtccagtacttcagattc
tggtgccagcaattgtcaatgcctcagcacatcaagatcactgtcacccgcaaaaccctg
tttgaggactcgttccaacaaataatgagcttcaatgcacaggacctccgcaggagacta
tggatcatattccctggggaagaaggtcttgattatggaggggtggcaagggagtggttc
ttcctgctgtctcacgaggtgctgaatcccatgtattgcctgtttgagtatgctgggaag
gacaactactgcctacagatcaaccctgcctcctacatcaaccctgatcaccttaagtac
ttcaaattcatcggacgcttcatcgccatggctcttttccacgggaagttcattgacaca
ggcttttcgctaccgttctacaagcgcatgctgaacaagccatgggcactgaaagatcta
gagtccattgacccagaattctacaattctctcatctggattaaggagaacgacattgag
gagtgtggcctggagatgtacttctctgtggacaaagagattctgggtgaaatcaccact
catgagctcaagccagacggaggagaggtcctggtcactgaggagaacaaggaggagtat
atcaggcttgtagcagagtggaggttgtccagaggtgtggaggagcagacccaggccttc
tttgagggcttcaatgaggtcctcccacagcagtacctgcagtactttgatgccaaagaa
cttgaggtcatgctgtgtgggatgcaggagatcgacctggcagactggcagaggaacacc
atctacagacactatgcacgcagcagcaagcaggtcctctggttctggcagctcatcaaa
gagatggacaatgagaagcggatgaggctcctccagttcgttacaggcacctgccggctt
cctgtcggaggctttgcagacctattggggagcaatggcccgcagaagttctgcatcgag
aaggtgggaaaggagaactggctacccagaagtcacacctgcttcaatcgattggatctg
cctccttacaaaagctacgagcagctgaaggagaaattgatgtttgcgattgaagagact
gagggctttgggcaggagtga
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