Oncorhynchus tshawytscha (Chinook salmon): 112267198
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Entry
112267198 CDS
T05605
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112267198
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M10
112267198
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Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Peptidase_M66
DUF4953
Peptidase_M54
Peptidase_M43
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
112267198
NCBI-ProteinID:
XP_024301173
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Position
LG14:39760223..39763723
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AA seq
464 aa
AA seq
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MEITDLLLLVVVAQSFAMPLSSLEETKKWLLAEKYLRRFYNLRAGLQGTKTDRSSDAMQA
KIREMQSFFNLQVTGSLDANTQELMSMARCGVPDVGEYNHFPRHLKWQNTIVTFRIVNYT
PDLKKADVDRAIRNAFNIWADVTPLTFKKLHEGKADIMILFGTKEHGDFNPFDGPDGLLA
HAYPPGRDIGGDTHFDEDEHWSKDSDAYNLFLVATHEFGHALGLSHSTDPGALMYPVYSY
SQGYPLSEDDITGIQALYGPNPRHRKVKPKPDAPNKCDPMLSFDAVTELRGETIIFKDRF
YWRLHPQFAEPEQTLIKSTWPSLPNKVDAAYEYPEKDMVFIFSGIRMWALNGYNLVEGYP
KYIHKLGLPKTVRTVDAAVYIPDTGKTLLFSEEHYWSYNEKTNTMDSGFPRSIEMDFPGM
AEEVDAAVYQYGYLHFFHEHTQFEYSYSARKVIQIVRTNSFLNC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcacagatttactgctccttgtagtggttgctcagtcatttgctatgcctcta
tcatcactggaggagactaaaaagtggctattagccgagaaatacctccgcaggttctac
aaccttcgagctggacttcagggaacaaagaccgacaggtcttcagacgccatgcaggct
aagatcagggagatgcagtccttcttcaacctccaggtgacggggagcctggacgctaac
acccaggagctgatgagcatggccaggtgtggtgtccctgacgtgggggaatacaaccac
ttcccccgacacctcaaatggcagaacaccattgtgaccttcagaatagtgaattatact
cctgatctgaagaaggctgatgtggacagagctatccgtaacgccttcaacatctgggct
gacgtcactcctctgaccttcaagaaactgcatgaggggaaggctgacatcatgatttta
tttgggacaaaagaacatggagacttcaacccctttgacggccctgacggtctcttagcc
catgcttatccccctggcagagacattggaggagacacacactttgatgaagatgaacat
tggtcaaaagactcagacgcctacaaccttttcctggtggccacccatgagtttggccat
gcccttggcttgtcccattctactgatcctggggctctgatgtacccagtctactcctat
agccagggttacccactgtctgaagatgatatcaccggcattcaagctctttatggcccg
aaccccaggcacagaaaagtgaagccgaagccagatgccccaaacaaatgtgaccccatg
ttgagttttgatgctgttactgagctcagaggagaaacaatcatcttcaaagacaggttt
tactggcgtctccatccccagtttgcagagcctgagcaaaccctgatcaaatccacctgg
ccttccctccccaacaaagtggatgctgcctatgagtaccctgagaaagacatggtcttc
atattcagtggtattagaatgtgggctctgaatggctataacctggtggagggctacccc
aaatacatccataaactgggactccccaagaccgtgcggacggtggatgctgctgtgtac
atcccagacaccggcaagacactgttgttctctgaggaacattactggagttataatgag
aagactaacacaatggacagcggcttcccaagatccattgagatggatttccctggaatg
gcagaggaggtggatgctgctgtatatcaatatggatatttgcatttcttccatgaacac
acacagtttgaatacagctacagtgcaaggaaggtcattcagattgttaggacaaactcc
tttctcaactgctga
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