Pseudomonas aeruginosa PAO1: PA1529
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Entry
PA1529 CDS
T00035
Symbol
lig
Name
(RefSeq) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
pae
Pseudomonas aeruginosa PAO1
Pathway
pae03030
DNA replication
pae03410
Base excision repair
pae03420
Nucleotide excision repair
pae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PA1529 (lig)
03410 Base excision repair
PA1529 (lig)
03420 Nucleotide excision repair
PA1529 (lig)
03430 Mismatch repair
PA1529 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pae03032
]
PA1529 (lig)
03400 DNA repair and recombination proteins [BR:
pae03400
]
PA1529 (lig)
Enzymes [BR:
pae01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
PA1529 (lig)
DNA replication proteins [BR:
pae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PA1529 (lig)
DNA repair and recombination proteins [BR:
pae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
PA1529 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PA1529 (lig)
MMR (mismatch excision repair)
DNA ligase
PA1529 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PA1529 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
RUBY_RBDX
DUF4796_N
Motif
Other DBs
NCBI-GeneID:
879269
NCBI-ProteinID:
NP_250220
UniProt:
Q9I3I4
LinkDB
All DBs
Position
1666025..1668409
Genome browser
AA seq
794 aa
AA seq
DB search
MTDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALEAEYPQLLTPDS
PTQRVSGTPASAFGEVRHEIPMLSLGNAFEEQDLLDFDRRVREGLADLLPGGDLLGGGAE
VEYSCEPKLDGLAVSLLYERGQLVRGATRGDGSTGEDITSNVRTIRNVPLKLHGEGWPEI
LEVRGEVFMSKAGFEALNAKAVETGGKTFANPRNAAAGSLRQLDSKITASRPLEFCAYGF
GQVSGTLPDTQVGILEAFRGWGIPISRELRLVKGAQACRDYYDDIGRRRDALAYEIDGVV
FKVNRIAFQRELGFRAREPRWAIAHKFPAREELTELLGVEFQVGRTGAVTPVARLKPVQV
AGVTVSNATLHNMDEVARLGLRIGDTVVIRRAGDVIPQVMQVVLERRPADAQAIEVPEHC
PVCGSAVERTQLVKRSKGKESISEGAIYRCVGRLSCQAQLKQAIIHFVSRRAMDIDGLGD
KIVEQLVDRGLVASPADLYTLTYEQVFELEGFAELSTNNLLTAIADSRKPSLARFIFALG
IPDVGEETAKLLARSLGSLERIGKALPEVLTYLPDVGAEVAYEIHNFFADEHNRQVIAQL
RDAEHGVQLQEEGEVAAEFAACASLAGFIDKLNIPFIAATGAEKLASRFGSLDGIIRADW
LDLRQVERLPERAAKSLRDFFDEPANVQRALAIEAQLREFGMHWQSERKAVEGLPLAGQT
WVLTGTLEAMSRDVAKDKLEGLGAKVAGSVSAKTHCVVAGPGAGSKLAKANELGVKVLDE
DGLLKLFDEHGVAR
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacccaggctgccgccgaacgcatcgcgcaactgcgaaccgaactggacacc
cacaattaccgttactacgtgctcgacgaaccgagcattcccgacgccgaatacgatcgc
ctgttccgcgagttgcaggcgctggaggccgagtacccgcaactgctgacgcccgactcg
ccgacccagcgggtcagcggcacgccggcctcggcgttcggcgaagtgcgccatgagatc
cccatgctcagcctcggcaacgccttcgaggagcaggacctgctggacttcgaccgccgc
gtacgcgaaggactggccgacctgttgcctggcggcgacctgctcggcggtggcgcggag
gtcgagtacagttgcgagccgaagctggacggcctggccgtcagcctgctctacgaacgc
ggccaactggtgcgcggcgccacccgtggcgatggcagcaccggcgaggacatcaccagc
aacgtacgcaccattcgcaacgtaccgctgaagctgcacggcgaaggctggccggagatc
ctcgaagtgcgcggcgaggtgttcatgtccaaggccggtttcgaggcgctcaacgccaag
gccgtggaaaccggcggcaaaaccttcgccaacccgcgcaacgcggcggccggcagcctg
cgccagctggattcaaagatcaccgccagtcgcccgctggaattctgtgcctacggcttc
ggccaggtcagcgggacgctgccggacacccaggtgggcatcctcgaggcgttccgcggc
tggggtatccccatcagtcgcgagctgcgcctggtcaagggcgcccaggcctgccgcgac
tactacgacgacatcggtcgccgacgcgatgcgctggcctacgagatcgacggcgtggtg
ttcaaggtcaaccgcatcgccttccagcgcgaactgggcttccgcgcgcgcgagccgcgt
tgggcgatcgcccacaagttccccgcgcgcgaggagttgaccgagctgctgggtgtcgag
ttccaggtcggccgcaccggcgccgtgaccccggtggcacgcctcaagccggtgcaggtg
gccggcgtcacggtgtccaatgcgaccctgcacaacatggatgaagtcgcccgcctgggc
ctgcgcatcggtgatacggtggtgatccgccgtgctggcgatgtgattccgcaggtcatg
caggtggtgctcgagcgccgcccggcggatgcgcaggctatcgaggtgcccgagcattgc
ccggtctgcggctcggccgtggagcggacccagttggtcaagcgcagcaagggcaaggag
tcgatcagcgagggcgccatctatcgctgcgtcggccgcctctcctgtcaggcgcagttg
aagcaggcgatcatccatttcgtatcgcgccgggcaatggatatcgacggtcttggcgac
aagatcgtcgagcaactggtggatcgcgggctggtcgcctcgccggcggatctctatacc
ctgacctatgaacaggtgttcgagctggaagggttcgccgagctgtccaccaacaacctg
ctgacggctatcgccgatagccgcaagccttcgctggcgcgcttcatcttcgctctgggg
attcccgacgtcggcgaggaaaccgccaagctgctggcgcgttcgctgggttcgctcgag
cggatcggcaaggcgctcccggaagtgttgacctacctgccggacgtcggcgccgaggta
gcctacgagatccacaacttcttcgccgacgagcacaaccgccaggtgatcgcccagttg
cgcgatgccgaacatggcgtgcagttgcaggaagagggcgaggtcgccgcggagttcgcc
gcctgtgcctcgctggccggtttcatcgacaagctgaacattcccttcatcgccgccacc
ggcgcggaaaagctggctagccgcttcggttcgctcgacggcatcatccgtgccgactgg
ctcgatctgcgccaggtggagcgtctgcccgagcgagcggcgaaaagcctgcgcgatttc
ttcgacgagccggccaacgtgcagcgtgccctggccatcgaggcgcagttgcgtgagttc
ggcatgcattggcagagcgagcgcaaggcggtcgaaggcctgcctctggccgggcagacc
tgggtgctgaccggcaccctggaggcgatgagccgggacgtggccaaggacaagctggaa
gggctcggcgccaaggtggccggctcggtgtcggccaagacccactgcgtggtcgccggg
cccggcgccggctcgaagctggccaaggccaacgagctgggcgtgaaggtgctcgacgaa
gacggcctgctgaaactgttcgacgagcacggcgtcgcccgctga
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integrated database retrieval system
