Pandoraea sp. XY-2: DRB87_00145
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Entry
DRB87_00145 CDS
T06086
Name
(GenBank) alpha-IPM isomerase
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand00290
Valine, leucine and isoleucine biosynthesis
pand00660
C5-Branched dibasic acid metabolism
pand01100
Metabolic pathways
pand01110
Biosynthesis of secondary metabolites
pand01210
2-Oxocarboxylic acid metabolism
pand01230
Biosynthesis of amino acids
Module
pand_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
DRB87_00145
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
DRB87_00145
Enzymes [BR:
pand01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
DRB87_00145
4.2.1.35 (R)-2-methylmalate dehydratase
DRB87_00145
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Motif
Pfam:
Aconitase_C
SpoU_methylas_C
DUF6653
Flavin_Reduct
Aconitase_2_N
Motif
Other DBs
NCBI-ProteinID:
QBC30084
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All DBs
Position
44733..45254
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AA seq
173 aa
AA seq
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MNAQAQTHAQTLEGRARCFGDDVNTDYIISSRRKRDSLDPQVLRQYLFETTHPEFAQSVL
TGDVIVAGKNFGCGSAMEVAVTAVVGAGIRVVLAQTFARTYFRNAINNGLYAIECDTSHI
REGDTVRVVFGERTEVWINDDATPLPGAQIAPEILQILNAGGLVPYLREHRTL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcaagcccaaactcacgcccaaacccttgaaggtcgcgcccgctgttttggc
gacgacgtcaacaccgactacatcatctcctcgcgccgaaagcgcgactcgctcgacccg
caagtgctgcgtcaatacctgttcgaaaccacgcatcccgagttcgcacagagcgtgctg
acaggcgacgtaatcgtcgcgggcaagaacttcggttgcggctcggccatggaagttgcc
gtgacggctgtcgtcggggcaggcattcgcgtggtgctggcgcagacctttgcgcgcacc
tatttccgcaacgccatcaacaacgggttgtacgcgatcgaatgcgacacgtcgcacatt
cgtgagggcgatacggtgcgcgtcgtcttcggcgagcgcacggaagtctggatcaacgac
gacgccaccccgttgcctggcgcacagattgcgccggagattcttcagattctgaacgcc
ggtgggctggtgccttacctgcgcgaacaccgcacgctctga
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