Petroclostridium sp. X23: QKW49_24360
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Entry
QKW49_24360 CDS
T09049
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
petr
Petroclostridium sp. X23
Pathway
petr00300
Lysine biosynthesis
petr00550
Peptidoglycan biosynthesis
petr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QKW49_24360
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QKW49_24360
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
petr01011
]
QKW49_24360
Enzymes [BR:
petr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
QKW49_24360
Peptidoglycan biosynthesis and degradation proteins [BR:
petr01011
]
Precursor biosynthesis
Amino acid ligase
QKW49_24360
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
HypA
DUF2807
Motif
Other DBs
NCBI-ProteinID:
WHH58888
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Position
5208351..5209793
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AA seq
480 aa
AA seq
DB search
MRLDKLIKAIEPEIVLGDRNVEISGIAYDSRKVNAGDLFVCIKGFKVDGHEFISQAIESG
AAAIVSEKEITGLSVPLVKVNNSRRAMALISAEFYDHPSTKFNLVGITGTNGKTTTTYLI
KTILEQQGRKVGLIGTNQNMIGDRILPTERTTPESMELQKLFAEMVIEDVDDVVIEVSSH
SLELNRVDGCHFEVGVFTNITQDHLDFHLNMENYLKAKTKLFQRCKIGIINCDDTGSTYI
LENGTCKMMTFGIEQGADIKATELEITSKGVGFQTITPEGECRIHLSIPGRFSIYNALGS
IGACMALGVDLNDIKQGLKVAKGVPGRAQIVETGKDFMVLIDYAHTPDGLKNILSAVKGF
VKGRVVTLFGCGGDRDKTKRPIMGRIAGAMSDFCIVTSDNPRTEDPMQIILQIEEGVKGT
ECPYIIIENRYEAIEYALRNAQEDDVIVLAGKGHETYQEINGKKYPFDENEIVKEILSKN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagattggataaattaataaaagcgattgaaccggaaattgtgttaggagaccggaat
gttgagattagcggtattgcgtatgattccaggaaggtaaatgcgggagatttatttgtt
tgtataaaaggctttaaggtggatgggcatgaatttatttcccaggcaattgaaagcgga
gctgcggctattgtatctgaaaaggaaataaccgggttatcagtaccactggttaaagtt
aataattcacggagagctatggcattgatttctgcagagttttatgatcatccttccaca
aagtttaatttagttggaattacaggtactaatggaaagacaaccactacctatttaatt
aagacaatactggagcagcaagggaggaaagtaggattaataggtaccaatcaaaatatg
ataggagaccggattctaccgaccgaaagaacaactcctgagtcgatggaattgcaaaag
ctatttgcagaaatggtgatagaagatgttgatgatgttgtaatagaggtatcttcccac
tcactggaattaaacagagtagatggatgccactttgaagtaggcgtcttcacaaatatt
acacaagaccatttggattttcatctaaacatggaaaactatttaaaagcaaaaacaaag
ctttttcaacggtgtaagataggtattattaattgtgatgatacgggtagtacatatata
cttgaaaatggaacttgtaagatgatgacctttgggattgaacaaggcgccgatattaaa
gcaacagaattggagattacatccaaaggcgttggttttcaaacaatcacaccggaagga
gaatgccgtattcacttaagcatacccgggaggttttctatttataatgctttaggaagt
attggcgcttgtatggcgttgggtgtggatttaaatgatattaagcaaggcttaaaggtt
gcaaagggagtgccgggtagagcgcaaattgtggaaaccggaaaagacttcatggttctg
attgattatgcgcatacgcctgatggtctgaaaaatatcttaagtgcggtaaaaggtttt
gtgaaggggagagttgtaacgctgttcggatgcgggggtgacagggataaaacaaagcgt
ccgatcatgggcaggattgccggtgcaatgtcagacttctgtattgtcacttctgataat
ccaagaactgaagacccgatgcagatcatacttcagattgaagaaggtgtaaaagggaca
gaatgtccatatatcattatagaaaataggtatgaagccattgaatatgcattgcgcaat
gctcaagaagacgatgtaatcgtattggcaggcaaaggacatgaaacgtaccaagagata
aatgggaagaaatacccttttgatgaaaatgagatcgttaaagaaattttatctaagaac
tag
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