Perognathus longimembris pacificus (Pacific pocket mouse): 125357209
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Entry
125357209 CDS
T08928
Symbol
Dse
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
plop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125357209 (Dse)
Enzymes [BR:
plop01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
125357209 (Dse)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
Motif
Other DBs
NCBI-GeneID:
125357209
NCBI-ProteinID:
XP_048209906
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All DBs
Position
9:38537664..38586558
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AA seq
982 aa
AA seq
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MGSFEDGLAAWEVWRSDATMRTHTRGAPSVFFIHFLCFVSAYVSDENPEVMIPFTNANYE
SHPMLYFSRAEVEELQLRASSSHEHIAARLTEAVHTMLSSPLEYLPPWDPKDYSARWNEI
YGNNLGALAMFCVLFPDNIEARDMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATA
YDFLYNYLSKTQQEKFLEVIANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLM
NQGYLQEAYLWTKQVLTIMEKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFD
INHFGHPWLKQHFAFMYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVLRNGSGNW
LADQIRRNRVVEGPGTPSKGQRWCTLHTEFLWYDASLKSVPPPDFGTPVLHYFEDWGVVT
YGSALPAEINRSFLSFKSGKLGGRAIYDIVHNNKYKDWIKGWRNFNAGHEHPDQNSFTFA
PNGMPFITEALYGPKYTFLNNVVMFSPAVSKSCFSPWEGQVTEDCSSKWSKYKHDQAASC
QGRVVAAMEKDGVVFIRGESAGAYNPQLNLKNIQRNLILLHPQLLLLVDQIHLGEESPVE
TAASFFHNVDVPFEETLVDGVHGAFIRQRDGLYKMYWMDDTGYSEKATLASVTYPRGYPY
NGTNYVNVTMHLRSPITRAAYLFIGPSVDVQSFNIHGDTRRLDVFITSSEHAYVVYLWTG
ETTGQSAFIQVIADRQKILFDQNSAIKSTPLPEVKDYAAIVERNLQHFKPVFQLLEKQIL
SRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQQQQQQQQQSRLKKSQRAGKRY
KFVDAVPDIFAQIEVNEKKIRQKAQIWAQKEVPIDEDEEMKDLLDFADVTYEKHKSGGQL
NGHVGQARMVTASHSRVPSLSASYTRLFLVLNIAIFFVMLAMQLTYFQRAQSLHGQRCLY
AVLLIDSCILLWLYSSCSQSQC
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttttgaagatggtttggctgcctgggaggtttggagatctgatgccacgatg
aggactcacacaaggggagctcccagtgtgtttttcatacattttctttgcttcgtgtca
gcctatgtctcagatgagaatccagaagtcatgattcccttcacaaacgccaactatgaa
agccaccctatgctgtacttctccagggctgaggtggaggagctgcagctcagggcctcg
agctcgcatgagcacatcgcagcccgactcaccgaggctgtgcacaccatgctgtccagc
cctttggagtacctccctccctgggatcccaaggactacagtgcccgctggaatgaaatc
tatgggaacaacctgggggccttggcaatgttctgtgtactgtttcccgacaacatcgaa
gcccgcgacatggccaaggactacatggagaggatggcagcgcagcctagttggttggtg
aaagatgcgccttgggatgaagtcccacttgctcactccctggtgggttttgccactgct
tatgacttcttgtacaactatctgagcaagacacaacaggagaagtttcttgaagtgatt
gccaatgcctcaggctatatgtatgaaacttcataccggagaggatggggctttcagtac
ctgcacaatcaccagcccaccaactgcatggctttactcacaggaagcctcgttctcatg
aatcaagggtaccttcaagaggcctacttgtggaccaaacaagttctgaccatcatggag
aaatcgctggtcctgctccgagaggtgacggatggctccctctatgaaggagttgcctat
ggcagctataccaccagatcgctcttccagtacatgtttcttgttcagagacactttgac
atcaaccacttcggccatccatggcttaagcaacactttgcctttatgtatagaaccatc
ttgccaggatttcaaagaacagtggctattgcagactcaaattacaactggttttatggt
ccagaaagccagttggtgttcctggataaatttgtcctgcgtaatggcagtggaaactgg
ctggctgaccagatcaggaggaaccgagtggtggaaggaccaggaacaccgtccaaagga
cagcgctggtgcactctgcacacagagttcctctggtacgatgccagcttaaaatcggtt
cctcctccagattttggcacccctgtgttgcattactttgaagactggggtgttgtgact
tatggaagtgcactgcctgcagaaatcaatagatccttcctatccttcaagtcgggaaaa
cttgggggacgtgcaatatatgacattgttcacaacaacaaatataaagattggatcaaa
ggatggcgaaattttaatgcaggacacgaacatccagaccaaaactcgttcacttttgct
cccaatggcatgccttttattaccgaggctctctacgggccaaagtacaccttcttaaac
aatgttgtgatgttttcccctgctgtgtccaagagctgcttttctccctgggagggtcag
gtcacagaagactgttcatcaaaatggtcaaaatacaaacatgaccaggcagctagctgt
caggggagagtggtagcagccatggagaaagatggggtggttttcatccgaggagaaagt
gcgggagcctataaccctcagctgaacttgaagaacattcagagaaatctgatcctcctg
catccacaacttctcctcctcgtggaccaaatccacttgggagaggagagccccgtggag
acagcagcgagtttcttccacaatgtggatgtgccttttgaggagacactcgtggatggg
gtccacggggctttcatcagacagcgtgatggcctctataaaatgtactggatggacgat
actggctacagtgagaaagcaaccttggcctcagtgacataccctcgaggatatccctac
aatgggaccaactatgtgaacgtcaccatgcacctccgaagtcccatcacgcgggcagct
tacctcttcatagggccatctgtagatgtgcagagctttaatatccacggggacactcgg
cgactcgatgtgttcataacttccagtgaacatgcctatgtggtttacctgtggacaggt
gagaccacaggacagtctgcctttatacaggtcattgcagatcgtcagaagattctgttt
gaccagaattcagccatcaagagcacccctctccccgaggtgaaggactatgctgctatc
gtggaaaggaacttgcagcattttaagccagtgttccaattactggagaagcagatcctt
tctcgagttcggaacacagctagctttaggaagactgctgagcgcctcctgaggttctcc
gataagaggcagactgaggaggccatcgacaggatcttcgccatatcgcagcagcagcag
caacagcagcagcaacaacaaagcagactaaagaaaagccaaagggcaggcaaacgctat
aaatttgtggatgctgttcctgatatttttgcacaaattgaagtcaatgaaaaaaagatt
cgccagaaagctcagatttgggcccagaaagaagtgcccatagatgaagatgaagaaatg
aaagaccttttagattttgcagatgtaacgtatgaaaaacacaaaagtggaggtcagctg
aacggccatgtgggacaggcacggatggtgacagcttctcacagccgagtgccgtccctc
tctgcgtcatacaccagactgtttttggttctgaacattgcaattttctttgtcatgtta
gcaatgcaactgacttatttccagagggcccagagcctccatggccaaagatgtctctat
gcggtccttctcattgatagctgtattctattgtggttgtactcttcttgttcccagtcc
cagtgctag
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