Parus major (Great Tit): 107209924
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Entry
107209924 CDS
T04864
Name
(RefSeq) B-cadherin-like isoform X2
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107209924
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmaj04515
]
107209924
Cell adhesion molecules [BR:
pmaj04515
]
Cadherins
Major cadherins
107209924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Big_9
Cadherin_4
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
107209924
NCBI-ProteinID:
XP_015495607
Ensembl:
ENSPMJG00000013777
LinkDB
All DBs
Position
11:complement(978227..984648)
Genome browser
AA seq
853 aa
AA seq
DB search
MRGPRSGLCPLSIFILLLLSPLLPAVALSPSPPCVLPGLRRGPLPAPGSSGGCAGPYRTE
EPDVGVREDGGSVRLPGVGRALAVPPQDAGFPRYAAGQPDPAPVPAKSRHSPQELPRAHA
ALRRQKRDWVIPPIKVPENERGPFPKKLVQIKSNRDRDTKIFYSITGQGADAPPEGIFTI
EKESGWMKVTQPLDREHIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVF
RGSVPEGALPGTSVMQVTATDADDAVETYNGVIAYSILSQEPREPHPQMFTVNRATGTLS
VIASGLDRERVREYTLTVQAADLDGEGLTTTALAVIEIADVNDNAPEFDPKTYEAAVPEN
VAGREVARLAVTDLDEPGTPAWRAVYSILRGNDGGAFAITTDPATNEGILRTAKGLDYEA
KQQFVLHVAVANEVPFVVKLPMATATVTVTVEDVNEAPVFVPLVQLATVSEDVPPGQTLT
ACTAQDPDKAQGQRIKYLVGHDPAGWLAVHPENGLVTARDHLDRESPFVKNSTYMAMLLA
VDDGSPPATGTGTLLLTLLDVNDNGPEAEPRDIIVCQRSPQPQLLTVTDRDLPPNTGPFR
AELTHGSEDSWAVEVGDTGDTVTLQLVAPLEPDTYSVYLRLLDQPGRAQVTIVTARVCAC
EGQAQGCPQRPQPVTALPFVLATLGALLALLLILLLLLLFMRRRKVTKEPLLLPEDDTRD
NIFYYGEEGGGEEDQNYDLRQLHRGLDARPEVIRNDVAPTLLPAPQYRPRPTNPDDIGTF
IEENLKAADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDGDQDYDYLNDWGGRFR
KLAELYGGGEEDD
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggccgcgctccgggctctgcccgctctccatcttcatcctcctcctcctctcc
ccgctcctgccggcggtcgccctttccccgtccccgccgtgcgtcctcccggggctgcgc
cgcgggccgcttcccgcaccagggagctccggaggctgcgcagggccgtacaggacggag
gagcccgatgtcggggtgcgggaggacgggggctccgtgcggctaccgggggtgggcagg
gctctcgccgtacccccccaagatgctggtttcccccggtatgccgctggccagccagac
cctgccccagttcctgcaaagagcaggcactccccccaggagctccccagggctcacgct
gctctcaggaggcagaagagggactgggtgatcccccccatcaaggttcctgaaaatgag
aggggccccttccccaaaaagctagttcagatcaaatccaaccgggacagagacaccaag
atcttctacagcatcacagggcagggagcagatgccccccccgagggcatcttcaccatt
gagaaggagtcaggctggatgaaagtgacacagccgctggaccgtgagcacatcgacaag
taccacctcttctcccacgccgtgtctgagaacgggaagccagtggaggagccgatggag
atcattgtgacagtgacagaccagaatgacaacaagccccagttcacgcaggaggtgttc
aggggctctgtgccagagggagctctcccaggcacctccgtcatgcaggtgacagccacg
gatgcggatgatgcggtggagacctacaatggtgtcatcgcctactccatcctcagccag
gagccacgggagccccatccccaaatgttcaccgtcaaccgggccactggcaccctcagt
gtgattgccagcggccttgaccgggagcgagtgcgggagtacacgctgactgtgcaggca
gctgacctggacggggagggactgaccaccacagcgctggctgtcatcgagatcgctgat
gtcaatgacaatgcccccgagtttgaccccaaaacgtacgaggcagctgtgccagagaac
gtggcggggcgggaggtggcccggctggctgtcaccgacctggacgagcctggcacgccg
gcgtggcgagccgtctactccatcctgcgcggcaacgatggcggtgcctttgccatcacc
accgaccctgccaccaacgagggcatcctccgcaccgccaagggtctggactacgaggcc
aagcagcagtttgtgctccatgtggccgtggccaacgaggtccccttcgtcgtgaagctg
ccgatggccactgctacggtgacagtcaccgtggaggatgtcaatgaggccccggtgttt
gtgccgctggtgcagctggccacggtgtcggaggatgtgcccccggggcagaccctcact
gcctgcacggcccaggaccctgacaaggcgcagggccagaggatcaagtacctggtgggg
cacgacccggcaggctggctggctgtgcaccccgagaatggcctggtgactgcgcgggac
cacctggaccgcgagtcccccttcgtcaagaacagcacctacatggccatgctgctggcc
gtggatgatggctcaccgccggctacgggcacgggcacgctactcctcaccctgctcgat
gtgaacgacaacggccccgaggccgagccacgggacatcattgtctgccagcgcagtccc
cagccccagctcctcaccgtcaccgaccgggacctgccccccaacaccggccccttccgt
gccgagctcacccacggctcggaggacagctgggctgtggaggtgggggacacaggtgac
acagtgacactgcagctggtggcaccgctggagccggacacctacagcgtgtacctgagg
ctgctggaccagccgggcagagcccaagtgaccattgtcaccgcacgggtctgtgcctgc
gaggggcaggcacagggctgtccccagagaccccagcctgtcaccgccctgccctttgtc
ctcgccaccctgggcgcgctactggccctgctgctcatcctgctgctgctgctgctcttc
atgaggaggaggaaggtgacgaaggagccgctgctgctgcccgaagatgacacaagggac
aacatcttctactacggggaagagggcggtggagaggaggaccagaactacgacctgcgg
cagctgcaccgggggctggacgcccggcccgaggtgatccgcaatgacgtggcccccacc
ctcctgccagccccccagtaccggccccgccccaccaaccccgatgatatcggcaccttc
atcgaggagaacctgaaggcggccgacacggaccccacggcccccccctacgactcgctg
ctggtgtttgactacgagggcagcggctcggaggccacctcgctcagctccctcaactcc
tccgcctccgacggggaccaggactacgactacctcaacgactggggcggccgcttccgc
aagctggccgagctctacggcggcggcgaggaggacgattag
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