Parus major (Great Tit): 107212390
Help
Entry
107212390 CDS
T04864
Name
(RefSeq) transient receptor potential cation channel subfamily V member 6 isoform X1
KO
K04975
transient receptor potential cation channel subfamily V member 6
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107212390
Ion channels [BR:
pmaj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107212390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
107212390
NCBI-ProteinID:
XP_015501037
Ensembl:
ENSPMJG00000003807
LinkDB
All DBs
Position
1:complement(86632772..86657959)
Genome browser
AA seq
724 aa
AA seq
DB search
MGVPLFGESNPFYSRIWNGLSQKLQGKKSWDKHLDEINLLQQKRIWESPLLQAAKENNLA
AIRKLLTDGTCDIYQRGAVGETALHVAAMYDNLEAAVALMEAAPELINERMTSELYEGQT
ALHIAAANQNTTLVKALLKRGANASTARATGHFFRRSSQNLFYFGEHVLSFAACVGNEEI
VQLLIENGADIRAQDSLGNTVLHILVLQPNKTFACHMYSLILSYDRSKEGPGSLELIPNN
EGLSPFKLAGVEGNTVMFQYLMQKRKQNLWSFGPLSTVLYDITEIDSWAEDQSFLELIVS
TKKREARQILDLTPVKELVSLKWNMYGRPYFCFLALFYILYMVCFTMCCVYRPLKPRTGN
RTSSRDNTIYVQKMLQESYVAYEDELRLVGELITVIGAVVILVLEIPDILRVGAAKYFGQ
TILGGPFHIIVITYACMILVTMVMRLTSTTGEVVPMSFALVLGWCNVMYFARGFQMLGPF
TIMIQKMIFGDLMRFCWLMAVVILGFASAFYIIFQTENPENLGQFYNYPMSLFTTFELFL
TIIDGPANYDVDLPFMYSVVYFAFAIIATLLMLNLLIAMMGDTHWRVAHEQDELWRAQVV
ATTVMLERKLPRCLWPRSGICGREFGLGDRWYLRIEDRIDPNKHKMMRYTEAFKAQDRDN
YDKGSEKLETSGDTLCKKELSALSLSRSTSRTSSHRGWEILRRNTFRQLCGEVGPAVDEE
VYDV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgcctttatttggggagagcaatcccttttattcccggatatggaatggacta
agtcagaagctgcaaggcaaaaaatcctgggataaacatctggatgaaatcaacttactc
cagcagaaaaggatctgggaatccccactcctccaggctgccaaagagaacaaccttgct
gccattaggaaacttctcactgacggaacatgcgatatctatcagagaggcgcagtggga
gagactgcccttcatgtagctgccatgtacgataacttggaggctgcagtggctctgatg
gaagcagctcctgagcttatcaatgagaggatgacatcagaactttatgaagggcagaca
gctctccacattgcagcagccaaccagaacaccacgttggtgaaggctttgcttaagaga
ggagccaatgccagcacagcaagggccactgggcacttcttcaggcgcagctcccagaac
cttttctattttggagagcatgttttatcatttgctgcctgtgtggggaatgaggaaatt
gtgcagctgctcattgaaaacggagctgacattagagctcaagattctctgggtaacact
gttcttcacatcctggttctccaacctaataagacgtttgcctgccacatgtacagcctg
atactttcctatgacaggagcaaagagggaccagggtcacttgaactgattcctaacaat
gaggggcttagtccattcaaactggctggagttgagggcaacactgtgatgtttcaatac
cttatgcagaagcggaagcagaatctctggtcctttggccccttgagcactgtgctgtat
gatatcacagagattgactcctgggctgaagatcagtccttccttgagctcatagtgtcc
accaagaagagagaggcacgccagatcttggacttaacccctgtgaaggagctggtgagc
ctgaagtggaacatgtatggtcgtccctatttctgtttcttggccttattctacatcctc
tacatggtctgcttcaccatgtgctgcgtctaccgccccctgaaaccccgaacaggcaac
agaaccagcagcagggacaacacaatctatgtgcagaaaatgcttcaggaatcatatgtg
gcatatgaggatgagctgaggctggtgggggagctgatcacagtcattggagctgtagta
attttggtccttgagattccagatatccttagagttggagcagcgaaatactttggacaa
acaattctaggagggcctttccacataattgtcatcacatatgcttgcatgatcctggtg
accatggtgatgcgtctcaccagcacaactggggaggtggtgcccatgtccttcgccctg
gtgctgggatggtgcaacgtcatgtacttcgcacggggcttccagatgctcggacctttc
accatcatgatccagaagatgatatttggagatcttatgcgcttttgctggctcatggct
gtggtgatattgggctttgcatcagctttttacatcatcttccagacagagaaccctgaa
aaccttgggcagttctacaactatcccatgtcgttgttcaccacttttgagctgttcctc
accatcattgatggccctgcaaactacgacgtggacctgccctttatgtacagtgtggtg
tactttgcttttgccatcattgccaccctccttatgctcaacttgttaattgccatgatg
ggtgacacccactggagagtggcccatgagcaggatgagctctggagagcccaggttgtt
gccactactgtcatgttggagcggaaactgccacggtgcctctggcctcgctcgggaatc
tgtgggcgggagtttgggctgggggaccgatggtatctcagaattgaagacaggattgat
cctaacaaacacaagatgatgaggtacacggaggcatttaaggctcaggatagggataac
tatgacaaaggttcagaaaaactggaaaccagcggggacaccctgtgcaagaaggaactg
tctgctctgtcactgtcacggagcacatccagaactagttctcaccgtggctgggagatc
ctgaggcgcaacaccttccgccagctttgtggagaggtcggtcctgccgtggatgaggag
gtgtatgatgtctaa
DBGET
integrated database retrieval system
