Parus major (Great Tit): 107212950
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Entry
107212950 CDS
T04864
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaj03016
]
107212950
Enzymes [BR:
pmaj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
107212950
Transfer RNA biogenesis [BR:
pmaj03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107212950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
DUF3280
Adaptin_binding
EAD8
XRCC4
Hydrolase
Hydrolase_6
Motif
Other DBs
NCBI-GeneID:
107212950
NCBI-ProteinID:
XP_015502373
Ensembl:
ENSPMJG00000018870
LinkDB
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Position
19:546273..593702
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AA seq
721 aa
AA seq
DB search
MDVWSYFHTCLVSVWLQRFYIYSAVAFGISLWIVVQFTSTRIKRKGEKSHGNPSAPEGTT
DKLGNGCATPQAQEVHVAGVKIFYGSQTGTAKRFAKALAEAVMSLNLPVEVINMGDYDPE
DGLAEETSSRNICVFLVATYTEGQPPESAAWFCKWLEEAASDFRVGKSFLQGLRYSVFGL
GNSAYVDHYNTVGRRMDRWLWMLGATRIMTRAEGDCSVAQSKHGSIEADFEAWKAKFLTR
LQVLCKGEKKPCSGKCKKGKCKSSGKQSKESSDHEPGTSEHEDTEAEELFESSSEEEAGG
TDSVIDVEDLGNIMGHMKKAKRERELEAGAAGAWRKEEAERREMITPALREALTKQGYKL
IGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPV
GTEWRWKMDQPEVILQEAMEKHQNMIRQFKGVSGVKAALLEEALAVKHCALSLVGEPIMY
PHINRFVRLLHQHGISTFLVTNAQFPEEIRRLEPVTQLYVSVDASTKESLRRIDRPLFKD
FWQRFLDSLKALAEKQQRTVYRLTLVKGWNVDELKAYADLISLGKPDFIEVKGVTYCGES
PASSLSMANVPWHGEVLSFVQELVRLLPEYGIACEHEHSNCLLLAHCKFQVDGEWRTWID
YGRFQELVREHERSGGSRSFTAAEYTARTPPWALFGARERGFDPSHVRFQRKNKAGNISG
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtggagctacttccatacttgcctggtgtccgtatggctgcagagattttac
atctattctgctgttgcttttgggatcagcctttggattgtcgttcagttcaccagcacc
agaatcaaaaggaagggtgagaaatcccatgggaatccctctgcccccgagggaacaaca
gacaaactgggaaatggatgtgccaccccccaggcacaggaggtccatgttgctggagtg
aagattttctatggctctcagactggcacagcaaagagatttgccaaagctctggctgaa
gctgttatgtccctcaatttgcctgtggaagtcattaacatgggagactatgatccagaa
gatggcttagcagaggagacaagcagcaggaacatctgtgtgttcctggtggccacctac
actgaggggcagcccccggagagcgcagcctggttctgcaagtggctggaagaggcagcc
agtgatttccgtgttgggaaaagcttcctgcaaggcctgagatactcagtgtttgggctg
gggaactcggcctatgtggatcactacaacacagttggaaggaggatggacaggtggctg
tggatgctcggtgccaccaggatcatgacgagggcggagggcgactgcagcgtggcccag
agcaagcacggcagcatcgaggccgactttgaggcctggaaagccaaattcctcactcgg
ctccaggtgctctgcaaaggtgaaaagaagccctgcagtgggaagtgcaagaagggaaag
tgcaaatcttcagggaagcagagcaaggaaagctcagaccatgaacctgggacatcagaa
cacgaggacactgaggcagaggaattgtttgaaagcagtagtgaggaggaagctggaggc
acagattctgtcatcgatgttgaagatcttggcaatatcatgggccacatgaagaaagca
aagagagagcgggagctggaggcaggagctgctggagcttggaggaaggaggaggctgag
aggagagagatgatcaccccagccctgagggaggcactcacaaaacaaggttataaactc
attgggagccattctggagtgaagctgtgccgatggacaaagtcgatgctgcggggccgt
gggggctgttacaagcacaccttctatggcattgagagccaccgctgcatggaggccacc
cccagcctggcctgtgccaacaagtgtgtcttctgctggaggcaccacacgaaccccgtg
ggcaccgagtggcgctggaagatggaccagcccgaggtgatcctgcaggaggccatggag
aaacaccagaacatgatcaggcagttcaaaggcgtgtcaggagtgaaggcagctctcctg
gaggaggccctggcagtgaagcactgtgccctgtccctggtgggggagcccatcatgtac
ccacacatcaaccgcttcgtcaggctcttgcaccagcacggcatctccaccttcctggtc
accaacgctcagttccccgaggagatcaggaggctggagcctgtgacccagctctatgtc
agtgtggatgccagcaccaaggagagcctgaggaggattgacagacccctcttcaaggac
ttctggcagaggtttctagacagcttaaaggccttggctgaaaagcaacaacgcactgtt
tataggctgaccctggtgaaaggctggaatgtggatgagctgaaagcttatgctgacctg
atatccctggggaaaccagacttcattgaggtcaagggtgtcacctactgcggggagagc
cctgccagcagcctgagcatggccaacgtgccgtggcacggggaggtgctgagctttgtg
caggagctggtgcggctgctcccggagtacggcatcgcctgcgagcacgagcactccaac
tgcctgctgctggcacactgcaagttccaggtggatggagagtggaggacctggatcgac
tacggccgtttccaggagctggtgagggagcacgagcggagcggcggctccaggagcttc
acagcagccgagtacacggccaggactcctccctgggccctcttcggggccagggaacgc
ggattcgacccctcccacgtgagattccagcggaagaacaaggcagggaacatctcgggg
tgctga
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