Pseudomonas mendocina ymp: Pmen_3266
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Entry
Pmen_3266 CDS
T00510
Name
(GenBank) D-serine ammonia-lyase
KO
K01753
D-serine dehydratase [EC:
4.3.1.18
]
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy00260
Glycine, serine and threonine metabolism
pmy00470
D-Amino acid metabolism
pmy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Pmen_3266
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pmen_3266
Enzymes [BR:
pmy01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.18 D-serine ammonia-lyase
Pmen_3266
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Gene cluster
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
ABP86019
UniProt:
A4XXF3
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All DBs
Position
complement(3615882..3617222)
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AA seq
446 aa
AA seq
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MILGQPLAQWRAQYPLLDELIALRETSWFNPAVAPAAEALGDVGLSAADVADARARLERF
APYLARAFPQTAASGGIIESDILPLPQMQALLREEAEGEIGALWLKRDSHLPISGSIKAR
GGIYEVLKHAEDLALAAGLLGLDDDYACLDSDAMRAFFGGYQVAVGSTGNLGLSIGIISA
RLGFQATVHMSADARQWKKDKLRAHGVTVVEYASDYSVAVEQGRRQAEADPRCHFVDDEN
SRHLFLGYAVAGERLRQQLAAANVVVDAEHPLFVYLPCGVGGGPGGVAFGLKLAFGDAVH
CLFAEPTHSPCMLLGVHTGRHEELAVQDFGIDNRTAADGLAVGRPSGFVGRAMQRLIDGY
YTVSDEQLFRYLALVEQTEGQRLEPSALAGMPGVLRVLGERQGYRQRMGLTPQRMARATH
LVWATGGSMVPEAEMDSYLARGRQLL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgattcttggccagccgcttgcccaatggcgcgcgcaatatccgctgctcgacgagctg
atcgccctgcgcgaaaccagctggttcaaccccgccgtggcgcctgctgccgaagcactg
ggcgatgtcggtttgagtgctgcggatgtggctgatgcccgcgcgcgcctcgaacgtttc
gcgccgtacctggcccgggcgttcccgcagacggccgccagcggcggcatcatcgagtcg
gatattttgcccttgccgcagatgcaggcgctgctgcgtgaagaggccgaaggcgagatc
ggcgcgctgtggctcaagcgcgacagccatctgcccatctccggttcgatcaaggcccgc
ggcggcatttacgaggtgctcaagcatgccgaggacctggcgctggcggccggcctgctc
ggtctcgacgacgattacgcctgcctcgacagcgatgcgatgcgcgccttcttcggcggc
tatcaggtggcggtcggctccaccggcaacctcggcctgtccatcggcatcatcagtgca
cgtctgggctttcaggccaccgtgcatatgtccgccgacgcgcgccagtggaagaaggac
aagctgcgcgcccatggcgtgaccgtggtcgagtacgccagcgattacagcgttgcggtg
gagcaggggcgccgccaggccgaggccgatccgcgttgccacttcgtcgatgacgagaac
tccaggcacctgtttctcggctacgcggtggccggtgaacgcctcaggcagcaactggcg
gcggccaatgtcgtggtcgatgccgagcatccgctgttcgtctacctgccctgtggtgtc
ggtggcgggccgggtggcgtggccttcggcctgaagctggcgttcggtgacgcggtgcac
tgcctgttcgccgaacccacgcattcgccgtgcatgctgctcggcgtgcataccggccgg
catgaagaactggcggtgcaggatttcggcatcgacaaccgcaccgcggccgatggcctg
gcggtagggcgaccatcggggttcgtcggccgcgccatgcagcgcctgatcgacggctat
tacacggttagcgacgagcagttgttccgttacctggcgctcgtggaacagaccgagggc
cagcgcctggagccttcggccctggccgggatgccgggtgtattgcgcgtgctgggcgag
cggcagggctatcgccagcgcatgggcctgacgccgcagcgcatggcgcgggcgacccat
ctggtctgggcgactggcggcagcatggtgccggaggcggagatggacagttacctggcg
cgggggcggcagctgttgtag
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