Populus trichocarpa (black cottonwood): 7485020
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Entry
7485020 CDS
T01077
Name
(RefSeq) probable terpene synthase 12
KO
K12742
isoprene synthase [EC:
4.2.3.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00900
Terpenoid backbone biosynthesis
pop01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
7485020
Enzymes [BR:
pop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.27 isoprene synthase
7485020
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GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
DUF6793
Motif
Other DBs
NCBI-GeneID:
7485020
NCBI-ProteinID:
XP_024461082
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Position
7:complement(13704964..13707624)
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AA seq
591 aa
AA seq
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MALCLFTNFPSVNSMNWKDMPRHPLPRAAHRTCINLQFTCSVSLKESHEVSKRRLANYQP
TTWSCDFLQSLKNDNADKIYKDKAMELEEEVRCMINSGDMEMLTMLEMIDDIQRLGLGHR
FEKDIKRKLDRISSSEQSYVEAEKSLRATALCFRLLRQHGYEISQDIFHGFLDDQGNFMA
SLHNDIEGMLSLYEASHLACEGEEILNKANKQTSIYLRNHLGNSDSMTAERVSHALEVPL
HHKMIMLEARWHIESYGKREDANPKLLQLSKLDFNMMQSVLQRDLQDMSRWWHDLGLKNK
LRFSRDRLMECFFWTVGMAFEPEFNSCRKGLTKVTSFITTIDDVYDVYGALDELEAFTEA
VERWDVSAVRNLPDYMKLCFLALFNTVNEMAYDHLKEQGEDAIPCLTKAWADLCKAFLQE
AKWSYNNITPSFEEYLENAWRSVSGTVILIHAYFLMGENISKQALDYLVNYDELLRWPSI
IFRLSNDLATSSAEIARGETANSISCYMYETGASEAEARKHIEKLIQKAWRNMNKCQIDN
ETPFARSFVGTAINLARIAQCTYQHGDGHGAPDSRSKNRISSLIIEPISFH
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcactttgtctctttaccaacttccctagcgtgaactccatgaattggaaagatatg
ccgaggcatcctctgccaagagcagctcatagaacttgcattaacttgcagttcacttgt
tcagtaagcttgaaagaatcccacgaagttagtaagagacgattggccaattaccaacca
acaacttggagctgcgatttcttgcagtctttaaagaatgataatgcagacaaaatatac
aaagacaaggcgatggagctagaagaggaggtgaggtgcatgattaacagtggagacatg
gagatgttaaccatgcttgaaatgattgatgacattcaacggttaggcttggggcatcgg
tttgaaaaagacataaagagaaaacttgatagaatttcttcttcagaacaaagttacgtt
gaagcagagaaatctctccgtgcgactgctctttgcttcaggttactgagacaacatggt
tatgagatttctcaagatatttttcatggctttttagatgatcaaggcaatttcatggcc
tcccttcacaacgatatcgaaggaatgcttagtttgtatgaagcttcacatcttgcctgc
gaaggagaagaaattttaaacaaggcgaataaacaaacaagcatatacttaagaaaccat
ctaggaaactcagactctatgactgctgaaagagtcagtcatgctctggaggtaccattg
catcacaagatgatcatgttagaagctcgatggcatattgaatcctacggtaagagggaa
gatgcgaatcccaaactactccaactttccaagttggatttcaacatgatgcaatcagtc
ttgcaaagagatctccaagacatgtcaaggtggtggcatgacctgggcttgaagaacaag
ctgagatttagcagagacagactaatggagtgctttttttggactgttggaatggccttt
gaacctgaatttaactcatgtcgcaaaggactgacaaaagtgacgtcattcataaccacc
atagatgatgtctatgatgtttatggtgctttggatgaattggaagcattcacagaggct
gttgaaaggtgggatgtcagtgctgtgagaaatcttccagactatatgaagttatgcttc
ttagcccttttcaacacagttaatgaaatggcatatgaccaccttaaagaacaaggagaa
gatgccattccttgtctaaccaaagcatgggctgatttatgcaaagcattcttgcaagaa
gcaaaatggagctacaacaatatcacaccatcatttgaggaatatcttgaaaatgcatgg
cgatcggtatcaggaactgtcatcctcatccatgcctattttcttatgggagaaaacatc
tccaagcaagctcttgattaccttgtaaactacgatgaattactcagatggccatccatt
atttttcgactctctaatgatttagccacttcatcagcagagatagccagaggggaaaca
gctaattcaatctcttgctacatgtacgaaaccggtgcttctgaggctgaggcgcgaaaa
cacatagagaaactgattcagaaggcatggaggaacatgaacaaatgtcaaattgataac
gaaactccttttgctagaagctttgtaggaacagcaattaatcttgctagaattgcccag
tgcacgtaccaacatggagatggtcatggagcaccagatagcagatccaagaacagaatc
tcgtccttgataattgaacccatttcatttcattaa
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