Pelodiscus sinensis (Chinese soft-shelled turtle): 102460305
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Entry
102460305 CDS
T02980
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pss03036
]
102460305 (KDM1A)
Enzymes [BR:
pss01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
102460305 (KDM1A)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
102460305 (KDM1A)
REST complex
102460305 (KDM1A)
Histone demethylases
102460305 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
Pyr_redox
AlaDh_PNT_C
FAD_oxidored
FAD_binding_2
HI0933_like
FAD_binding_3
Thi4
Pyr_redox_3
GIDA
DUF6827
2-Hacid_dh_C
Sec10_N
Lycopene_cycl
Motif
Other DBs
NCBI-GeneID:
102460305
NCBI-ProteinID:
XP_014424066
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MKDLCALVHIRILKRSVYHPQLGSLIERFNHALKNMIQKVLIDNYPSYSFFRSPKTITFS
VFLPDVSSACFGIKTHYLVLWCLPCNCAVLQVEYREMDESLANLSEDEYYSEEERNAKAE
KEKKLPPPPPPAPPEEENESEPEEPSGQAGGLQDDNSGGYGDGQASGVEGAAFQSRLPHD
RMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDT
VLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTL
LEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEAN
GQADTVKVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKH
VKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKS
KHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANAT
PLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEV
IAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKV
VLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDV
IVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITP
GPAIPGSPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQPTP
GVPTPQTPSM
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgtgtgcactggtccacatacgcatcctgaagaggtcagtctaccaccca
cagttgggcagcctcatcgagcgcttcaaccatgccctcaagaatatgatccagaaagtg
cttattgacaactacccttcttattcatttttcaggagtccaaagacgataacgttttct
gttttcctccctgatgtttccagtgcttgctttggtattaaaacccattatcttgttctg
tggtgcttaccatgtaattgtgctgttttgcaggtggagtacagggagatggatgagagt
cttgcaaacctctctgaagatgagtattattccgaggaggagagaaatgctaaagcggag
aaagagaaaaagctgccaccaccaccacctccagcccctccagaagaagagaatgagagc
gaaccagaagagccatctgggcaagcaggaggacttcaagacgacaattctggagggtat
ggagacggccaagcatcaggtgtggagggcgcagctttccagagtagacttccacatgat
cgtatgacctctcaagaagctgcgtgttttccagacatcatcagtggcccgcagcaaact
cagaaagtgtttctgtacatcaggaatcgcacattgcagctttggttggacaatccaaag
atccagctgacattcgaggcaactcttcaacaactagaagcaccttataacagtgacact
gttctagttcacagagtgcacagctatctagaacgtcatggtctaatcaacttcggtatc
tacaaaagggtaaagcctctaccaacgaagaagactggcaaggtgatcattataggttct
ggagtctctggcttggctgcagctcgccagttacagagttttgggatggatgtcacgctt
ctggaagccagggatcgtgtaggaggaagagttgctacatttcgcaaaggaaactatgtt
gctgatctaggtgccatggtcgtaacagggctaggagggaatccaatggctgtggtcagc
aaacaagtaaatatggaactggctaagataaaacaaaaatgcccgctttatgaagccaac
ggacaagctgacactgtcaaggttcctaaggagaaagatgaaatggtagagcaggaattc
aaccgtttgctggaggccacctcctatctcagtcatcagctggacttcaatgtcctcaat
aacaaaccagtctccttaggacaggctctggaggttgtcatacaacttcaagagaagcat
gtgaaggatgaacagattgaacattggaagaagattgtaaaaacacaagaggagctgaaa
gatctccttaacaagatggtgaatttaaaagagaagattaaagagctccatcagcagtat
aaggaggcatctgaagtgaaaccacctcgggatattactgcagagttccttgtgaagagc
aaacatcgagatcttactgccctctgcaaggagtatgatgagttggcagaaacacaaggg
aagctggaagagaagctccaagaacttgaagccaatccaccaagtgatgtttatttatca
tcaagggacagacagatacttgactggcattttgcaaatctagaatttgctaatgccaca
ccactatctacactctcattgaagcactgggatcaggatgatgattttgaattcacaggc
agtcaccttactgtgagaaatggctattcctgtgtgcctgtagccttggcagaaggtttg
gacataaaattaaatacagcggttcgacaggttcggtatactgcttcaggctgtgaagtg
atagctgtgaacacccgctccactagccagacttttatttataaatgtgatgctgtcctg
tgcactctgcctctgggagtgttgaaacagcaaccacctgctgtacagtttgtgccacct
cttccagagtggaaaacgtccgctgtgcagagaatgggttttgggaatcttaacaaggtg
gtattatgttttgaccgtgttttctgggatccaagtgtcaatttgtttggtcatgttggc
agcactactgccagcagaggagaactttttctgttctggaatctctacaaagctccgatt
ctcttggccttagtagctggagaagcagctgggatcatggaaaacatcagtgatgatgtc
attgttgggcgttgccttgcaattctcaaaggcatctttggcagcagtgctgtcccccag
cccaaggagacagtggtatcccgttggcgtgctgacccttgggcccgggggtcctattct
tatgtagcagctggatcttctggaaatgattatgacttgatggctcagccaattactcca
ggaccagccattccaggttctcctcagccaattcctcgcctcttcttcgcaggagaacat
acaattcgcaattacccagcaactgtccacggtgctctgctgagtgggctgagagaagca
gggcgcattgcagaccagtttcttggggcaatgtacacactgcctcgccaacctacccct
ggtgttccaacaccacagacccctagcatgtga
DBGET
integrated database retrieval system
