KEGG   Pan troglodytes (chimpanzee): 449032
Entry
449032            CDS       T01005                                 
Symbol
KDM5D
Name
(RefSeq) lysine-specific demethylase 5D
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ptr  Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ptr01009]
    449032 (KDM5D)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptr03036]
    449032 (KDM5D)
Enzymes [BR:ptr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     449032 (KDM5D)
Protein phosphatases and associated proteins [BR:ptr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     449032 (KDM5D)
Chromosome and associated proteins [BR:ptr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    449032 (KDM5D)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD ASH2L-like_WH
Other DBs
NCBI-GeneID: 449032
NCBI-ProteinID: NP_001008975
Ensembl: ENSPTRG00000022503
VGNC: 49003
UniProt: Q5XUN4
LinkDB
Position
Y:18095985..18135928
AA seq 1535 aa
MEPGCNEFLPPPECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERKILDLYSLSKIVI
EEGGYEAICKDRRWARVAQRLHYPPGKNIGSLLRSHYERIIYPYEMFQSGANHVQCNTHP
FDNEVKDKEYKPHSIPLRQSVQPSKFSSYSRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
PGPKMMGLGLMAKDKDKTVHKKVTCPPTVTVKDEQSGGGNVSSTLLKQHLSLEPCTKTTM
QLRKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPK
CILAECKQPPEAFGFEQATQEYTLQSFGEMADSFKSDYFNMPVHMVPTELLEKEFWRLVS
SIEEDVTVEYGADIHYKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLAQSVLCHI
NADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK
MLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYN
FAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHKEM
FIMVQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVC
LSHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWANKVRVALEVEDGRKRS
FEELRALESEARERRFPNSELLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQLTLTEL
RVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQDEAREALATLPSSPGLLRSLLERGQQLGV
EVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAEL
QELLTIAERWEEKAHFCLEARQKHPPATLEAIIRETENIPVHLPNIQALKEALTKAQAWI
ADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKTFLKKN
SCYTLLEVLCPCADAGSDSTKRSRWMEKALGLYQCDTELLGLSAQDLRDPGSLIVAFKEG
EQKEKEGILQLRRTNSAKPSPLAPSLMASSPTSICVCGQVPAGVGALQCDLCQDWFHGQC
VSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLP
EGEALQCLTERAIGWQDRARKALASEDVTALLRHLAELRQQLQAKPRPVYTSATACDPIR
EGSGNNISKVQGLLENGDSVISPENMAPGKGSDLELLSSLLPQLTGPVLELPEAIRAPLE
ELMMEGDLLEVTLDENHSIWQLLQAGQPPDLDRIRTLLELEKFEHQGSRTRSRALERRRR
QQKVDQGRNVENLVQQELQSKRARSSGIMSQVGREEEHYQEKADRENMFLTPSTDHSPSL
KGNQNSLQHKDSGSSAACPSLMPWLQLSYSDEQQL
NT seq 4608 nt   +upstreamnt  +downstreamnt
atggaaccggggtgtaacgagttcctgccgccaccggagtgcccggtttttgagcctagc
tgggctgaattccaagacccgctaggctacattgcgaaaataaggcccatagcagagaag
tctggcatctgcaaaatccgcccacccgcggattggcagcctccttttgcagtagaagtt
gacaatttcagatttactcctcgcatccaaaggctaaatgaactggaggcccaaactaga
gtgaaattgaactatttggatcagattgcaaaattctgggaaattcaaggctcctcatta
aagattcccaatgtggagcggaagatcttggacctctacagccttagtaagattgtgata
gaggaaggtggctatgaagccatctgcaaggatcgtcggtgggctcgagttgcccagcgt
ctccactacccaccaggcaaaaacattggctccctgctacgatcacattacgaacgcatt
atttacccctatgaaatgtttcagtctggagccaaccatgtgcaatgtaacacacacccg
tttgacaatgaggtaaaagataaggaatacaagccccacagcatcccccttagacagtct
gtgcaaccttcaaagttcagcagctacagtcgacgggcaaaaaggctacagcctgatcca
gagcctacagaggaggacattgagaagaatccagagctaaagaagttacagatctatggg
ccaggtcccaaaatgatgggcttgggccttatggctaaggataaggataagactgtgcat
aagaaagtcacatgccccccaactgttacggtgaaggatgagcaaagtggaggtgggaac
gtgtcatcaacattgctcaagcagcacttgagcctagagccctgcactaagacaaccatg
caacttcgaaagaatcacagcagtgcccagtttattgactcatatatttgccaagtatgc
tcccgtggggatgaagatgataagcttcttttctgtgatggctgtgatgacaattaccac
atcttctgcttgttgccaccccttcctgaaatccccagaggcatctggaggtgcccaaaa
tgtatcttggcggagtgtaaacagcctcctgaagcttttggatttgaacaggctacccag
gagtacactttgcagagttttggtgaaatggctgattccttcaagtccgactacttcaac
atgcctgtacatatggtgcctacagaacttttagagaaggaattctggaggctggtgagc
agcattgaggaagacgtgacagttgaatatggagctgatattcattacaaagaatttggc
agtggctttcctgtcagcaatagcaaacaaaacttatctcctgaggagaaggagtatgcg
accagtggttggaacctgaatgtgatgccagtgctagctcagtctgttctctgtcacatc
aatgcagacatctcaggcatgaaggtgccctggctgtatgtgggcatggttttctcagca
ttttgttggcatattgaggatcactggagttactctattaactatctgcattggggtgag
ccgaagacctggtatggtgtaccctccctggcagcagagcatttggaggaggtgatgaag
atgctgacacctgagctgtttgatagccagcctgatctcctacaccagcttgtcactctc
atgaatcccaacactttgatgtcccatggtgtgccagttgtccgcacaaaccagtgtgca
ggggaatttgtcatcacttttcctcgtgcttaccacagtggttttaaccaaggctacaat
tttgctgaagctgtcaacttttgtactgctgactggctacctgctggacgccagtgcatt
gaacactaccgccggctccggcgctattgtgtcttctcccacgaggagctcatctgcaag
atggctgccttcccagagacgttggatctcaatctagcagtagctgtgcacaaggagatg
ttcattatggttcaggaggagcgacgtctacgaaaggcccttttggagaagggcgtcacg
gaggctgagcgagaggcttttgagctgctcccagatgatgaacgccagtgcatcaagtgc
aagaccacgtgcttcttgtcagccctggcctgctacgactgcccagatggccttgtatgc
ctttcccacatcaatgacctctgcaagtgctctagtagccgacagtacctacggtatcgg
tacaccttggatgagctccccaccatgctgcataaactgaagattcgggctgagtctttt
gacacctgggccaacaaagtgcgagtggccttggaggtggaggatggccgtaagcgcagc
tttgaagagctaagggcactggagtctgaggctcgtgagaggaggtttcctaatagtgag
ctgcttcagcgactgaagaactgcctgagtgaggtggaggcttgtattgctcaagtcctg
gggctggtcagtggtcaggtggccaggatggacactccacagctgaccttgactgaactc
cgggtccttcttgagcagatgggcagcctgccctgtgccatgcatcagattggggatgtc
aaggatgtcctggaacaggtggaggcctatcaagatgaggctcgtgaggctctggccaca
ctgccctctagtccagggctattgcggtccctgttggagagggggcagcagctgggtgta
gaggtgcctgaagcccatcagcttcagcagcaggtggagcaggcgcaatggctagatgaa
gtgaagcaggccctggccccttctgctcacaggggctctctggtcatcatgcaggggctt
ttggttatgggtgccaagatagcctccagcccttctgtggacaaggcccgggctgagctg
caagaactactgaccattgcagagcgctgggaagaaaaggctcatttctgcctggaggcc
aggcagaagcatccaccagccacactggaagccataattcgtgagacagaaaacatccct
gttcacctgcctaacatccaggctctcaaagaagctctgactaaggcacaagcttggatt
gctgatgtggatgagatccaaaatggtgaccactacccctgtctggatgacttggagggc
ctggtggctgtgggccgggacctgcctgtggggctggaggagctgagacagctagaactg
caggtattgacagcacattcctggagagagaaggcctccaagacctttctcaagaagaat
tcttgctacacactgcttgaggtgctttgcccgtgtgcagacgctggctcagacagcacc
aagcgtagccggtggatggagaaggcgctggggttgtaccagtgtgacacagagctgctg
gggctgtctgcacaggacctcagagacccaggctctctgattgtggccttcaaggaaggg
gaacagaaggagaaggagggtatcctgcagctgcgtcgcaccaactcagccaagcccagt
ccactggcaccatccctcatggcctcttctccgacttctatctgtgtgtgtgggcaggtg
ccagctggggtgggagctctgcagtgtgacctgtgtcaggactggttccatgggcagtgt
gtgtcagtgccccatctcctcacctctccaaagcccagtctcacttcatctccactgcta
gcctggtgggaatgggacacaaaattcctgtgtccactgtgtatgcgctcacgacggcca
cgcctagagacaatcctagccttgctggttgccctgcagaggctgcccgtgcggctgcct
gagggtgaggcccttcagtgtctcacagagagggccattggctggcaagaccgtgccaga
aaggctctggcctctgaagatgtgactgctctgttgcgacacctggctgagcttcgccaa
cagctacaggccaaacccagaccggtctacacttcagccactgcctgtgaccctatcaga
gaaggcagtggcaacaatatttctaaggtccaagggctgctggagaatggagacagtgtg
atcagtcctgagaacatggctccaggaaagggctctgacctggagctactgtcctcactg
ttgccgcagttgactggccctgtgttggagctgcctgaggcaatccgggctcccctggag
gagctcatgatggaaggggacctgcttgaggtgaccctggatgagaaccacagcatctgg
cagctgctgcaggctggacagcctccagacctggacagaattcgcacacttctggagctg
gaaaaatttgaacatcaagggagtcggacaaggagccgggctctggagaggcgacggcgg
cagcagaaggtggatcagggtagaaacgttgagaatcttgttcaacaggagcttcagtca
aaaagggctcggagctcagggattatgtctcaggtgggccgagaagaagaacattatcag
gagaaagcagaccgtgaaaatatgttcctgacaccttccacagaccacagcccttccttg
aaaggaaaccaaaatagcttacaacacaaggattcaggctcttcagctgcttgtccttct
ttaatgccttggctacaactctcctactctgatgagcaacagttgtga

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