| Entry | T01005 |
| Org code | ptr |
| Name | Pan troglodytes (chimpanzee) |
| Annotation | yes |
| Taxonomy | TAX: 9598 |
| Lineage | Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: animals [BR:br08612] |
| Data source | RefSeq (Assembly: GCF_028858775.2 Chromosome)
BioProject: 945513 |
| Chromosome | 1 |
| Sequence | RS: NC_072398 |
| Length | 231299448 |
| Chromosome | 2 |
| Sequence | RS: NC_086015 |
| Length | 201579334 |
| Chromosome | 3 |
| Sequence | RS: NC_072401 |
| Length | 191670129 |
| Chromosome | 4 |
| Sequence | RS: NC_072402 |
| Length | 178964043 |
| Chromosome | 5 |
| Sequence | RS: NC_072403 |
| Length | 183320697 |
| Chromosome | 6 |
| Sequence | RS: NC_072404 |
| Length | 174648847 |
| Chromosome | 7 |
| Sequence | RS: NC_072405 |
| Length | 155691389 |
| Chromosome | 8 |
| Sequence | RS: NC_072406 |
| Length | 146288486 |
| Chromosome | 9 |
| Sequence | RS: NC_072407 |
| Length | 136991367 |
| Chromosome | 10 |
| Sequence | RS: NC_072408 |
| Length | 140160335 |
| Chromosome | 11 |
| Sequence | RS: NC_072409 |
| Length | 118863153 |
| Chromosome | 12 |
| Sequence | RS: NC_072410 |
| Length | 122853238 |
| Chromosome | 13 |
| Sequence | RS: NC_072411 |
| Length | 144476839 |
| Chromosome | 14 |
| Sequence | RS: NC_072412 |
| Length | 120149342 |
| Chromosome | 15 |
| Sequence | RS: NC_072413 |
| Length | 104701121 |
| Chromosome | 16 |
| Sequence | RS: NC_072414 |
| Length | 93846347 |
| Chromosome | 17 |
| Sequence | RS: NC_072415 |
| Length | 90695042 |
| Chromosome | 18 |
| Sequence | RS: NC_072416 |
| Length | 94528409 |
| Chromosome | 19 |
| Sequence | RS: NC_072417 |
| Length | 99595324 |
| Chromosome | 20 |
| Sequence | RS: NC_072418 |
| Length | 68087067 |
| Chromosome | 21 |
| Sequence | RS: NC_072419 |
| Length | 78115444 |
| Chromosome | 22 |
| Sequence | RS: NC_072420 |
| Length | 51350302 |
| Chromosome | 23 |
| Sequence | RS: NC_086016 |
| Length | 59520411 |
| Chromosome | X |
| Sequence | RS: NC_072421 |
| Length | 153896354 |
| Chromosome | Y |
| Sequence | RS: NC_072422 |
| Length | 36447294 |
| Chromosome | MT; Circular |
| Sequence | RS: NC_001643 |
| Length | 16554 |
| Statistics | Number of nucleotides: 3177756316
Number of protein genes: 22560
Number of RNA genes: 4167
|
| Created | 2005 |
| Reference | PMID: 38811727 |
| Authors | Makova KD, Pickett BD, Harris RS, Hartley GA, Cechova M, Pal K, Nurk S, Yoo D, Li Q, Hebbar P, et al. |
| Title | The complete sequence and comparative analysis of ape sex chromosomes. |
| Journal | Nature 630:401-411 (2024)
DOI: 10.1038/s41586-024-07473-2 |
| Reference | PMID: 16136131 |
| Authors | Chimpanzee Sequencing and Analysis Consortium. |
| Title | Initial sequence of the chimpanzee genome and comparison with the human genome. |
| Journal | Nature 437:69-87 (2005)
DOI: 10.1038/nature04072 |
| Reference | PMID: 15164055 (chromosome 22) |
| Authors | Watanabe H, Fujiyama A, Hattori M, Taylor TD, Toyoda A, Kuroki Y, Noguchi H, BenKahla A, Lehrach H, Sudbrak R, et al. |
| Title | DNA sequence and comparative analysis of chimpanzee chromosome 22. |
| Journal | Nature 429:382-8 (2004)
DOI: 10.1038/nature02564 |
| Reference | PMID: 16388311 (chromosome Y) |
| Authors | Kuroki Y, Toyoda A, Noguchi H, Taylor TD, Itoh T, Kim DS, Kim DW, Choi SH, Kim IC, Choi HH, et al. |
| Title | Comparative analysis of chimpanzee and human Y chromosomes unveils complex evolutionary pathway. |
| Journal | Nat Genet 38:158-67 (2006)
DOI: 10.1038/ng1729 |
| Reference | PMID: 7530363 |
| Authors | Horai S, Hayasaka K, Kondo R, Tsugane K, Takahata N |
| Title | Recent African origin of modern humans revealed by complete sequences of hominoid mitochondrial DNAs. |
| Journal | Proc Natl Acad Sci U S A 92:532-6 (1995)
DOI: 10.1073/pnas.92.2.532 |
Pan troglodytes (chimpanzee)