Rhodoferax antarcticus: RA876_13060
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Entry
RA876_13060 CDS
T04655
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RA876_13060
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rac01007
]
RA876_13060
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rac03016
]
RA876_13060
Enzymes [BR:
rac01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
RA876_13060
Amino acid related enzymes [BR:
rac01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RA876_13060
Transfer RNA biogenesis [BR:
rac03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RA876_13060
Prokaryotic type
Other AARSs
RA876_13060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1_2
BIR
Zn-ribbon_8
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
APW47132
LinkDB
All DBs
Position
2726394..2729282
Genome browser
AA seq
962 aa
AA seq
DB search
MTTQTDYRSTLNLPDTPFPMRGDLPKREPVWVKSWEDQGLYQKLRDARQGAPLFVLHDGP
PYANGQIHMGHAVNKILKDMIVKARQLKGMDAVYIPGWDCHGLPIENAIEKKYGRNLARD
EMQAKSRAFAVKQIALQMADFKRLGVLGDWDHPYLTMAFKTEANEIRAFKRVVERGFVYR
GLKPVYWCFDCGSSLAEFEIEYADKKSQTLDVGFLCAEPAKLAAVFGLAAIEKQAFAVIW
TTTAWTIPANQALNLNPDLTYALVDTERGLLVLAESLVEKCMVRFGLSGKVLATTLGKNL
AGLNFKHPLAHVNPGYDRLSPIYLADYATADDGTGVVHSAPAYGVEDFNSCVSHGMAYDD
ILNPVQGNGVFDAELPLFGGQHIWKACPVIINALREAGRLFATENIVHSYPHCWRHKTPV
IYRAAAQWFIRMDEGVGIFTKDKAPLTLRQTALAAIEKTAFYPENGKVRLRDMIAGRPDW
CISRQRSWGVPLPFFLNKDSGELHPKTMAILDIAADMVEQGGIEAWSKATKAEILAKVGC
EADADAYTKSSDILEVWFDSGTTHTTVLRGSHKGCGHDVIDPATGQSGPEADLYLEGHDQ
HRGWFHSSLLTACAMYDRAPYQGILTHGFTVDSKGHKMSKSAGNGVDPQETSKKLGAEII
RLWVASSDYSGDIAGDEKILARVVDIYRRVRNTLKFLLANTHDFDPATDSVALDQMVEID
RYALSRAAQLQAEVLAHYEVYEFHPVVAKLQIYCSEDLGSFYLDVLKDRLYTTGAHSLAR
RSAQTALWQITQAFVHWMSPFLSFTAEEAWAVLGAQGKTPVATRDSIFMDTYSTLAPADD
ALLAKWARIREIRDLVNKDIEVLRANGLVGSSLQAEVELTVAADDFALLSSLGADLKFVF
ITSAIDMIAGDALSIRASASKGIKCERCWHYSDAIGSDAAHPTLCPRCSSNLFGSGETRI
FV
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcaaactgattaccgcagcaccctgaacctgcccgacaccccgtttcccatg
cgcggcgacctgcccaagcgcgagccggtgtgggtcaagtcctgggaagaccaggggctg
taccaaaagctgcgcgacgcacgccaaggcgccccgctgtttgtgctgcacgacggcccg
ccttatgccaacggccagattcacatgggccatgcggtcaacaagattctgaaagacatg
atcgtcaaggcgcgccagctcaagggcatggacgcggtctacatccccggctgggactgc
cacggcctgccgatcgagaacgccatcgagaaaaagtatggccgcaacctggcccgtgac
gagatgcaggccaaaagccgcgcttttgcggtcaagcagatcgcgctgcaaatggccgac
ttcaagcgcctgggtgtgctgggcgactgggaccacccctacctgaccatggctttcaag
accgaagccaatgaaatccgcgccttcaagcgcgtggtggaacgcggttttgtctatcgc
ggcctgaaacccgtgtactggtgttttgactgcggctccagcttggccgagttcgagatc
gaatacgccgacaaaaagtcgcaaacgctggatgttggctttttgtgcgctgaacccgcc
aaactcgccgctgtgtttgggctagctgctattgaaaagcaagcctttgcggttatctgg
acgaccaccgcctggaccatccccgccaaccaggcgctcaatctgaaccccgatctgacc
tatgcgctggtcgataccgagcgcggcctgctggtgctggccgagagtttggttgaaaaa
tgcatggtgcgtttcggcctgagcggcaaggtgctggccaccacgctgggcaaaaacctg
gctggcctgaatttcaaacacccgctggcccatgtgaacccaggttacgaccgactcagc
ccgatttatctggccgactacgccacggctgacgacggcaccggcgtggtgcacagcgca
cccgcctatggggtagaggatttcaacagctgcgtctctcatggcatggcctatgacgac
atcttgaacccggtgcaaggcaatggcgtttttgatgccgaactgccgctgtttggcggc
caacacatctggaaagcctgcccggtcatcatcaacgcgctgcgcgaggcgggccgactg
tttgccaccgagaacatcgtgcacagctacccgcactgctggcgccacaagacgccggta
atctaccgcgcggctgcgcagtggttcatccgcatggacgaaggtgtgggcatttttacc
aaggataaagcgccgctaacccttaggcagactgcactggctgctattgaaaagacagcg
ttttaccccgagaacggcaaggtgcgcctgcgcgacatgattgccgggcggcccgattgg
tgcatcagccgccagcgcagctggggcgtgccgctgccgtttttcctgaacaaagacagc
ggcgaactgcatccaaaaaccatggccattctcgacatcgccgccgatatggtcgaacag
ggcggcatcgaagcctggagcaaagccaccaaagccgagattctggcgaaagtcggttgc
gaggccgatgcagacgcttacaccaagagcagcgacattctggaggtctggtttgactcc
ggcaccacccacaccaccgtgctgcgtggctcgcacaagggctgcggccatgacgtcatc
gacccggccaccggccaaagcggccccgaagctgacctgtacttggaaggccacgaccag
caccgcggctggttccattccagcttgctgaccgcctgcgccatgtacgaccgtgcacca
tatcagggcatcctgacgcatggtttcaccgtggacagcaagggccacaagatgagcaag
agcgccggtaacggcgtcgacccgcaggaaaccagcaagaagctcggtgccgaaatcatt
cggctttgggtcgcctccagcgactactctggcgacattgccggtgacgaaaaaattctg
gcgcgcgtggtggacatttaccggcgcgtgcgcaacacgctcaagttcctgctggccaac
acgcacgactttgacccagccaccgacagcgttgcgcttgaccaaatggtcgaaattgac
cgctacgccctgagccgcgctgcccaattgcaagctgaagtgctggcgcactatgaggtg
tacgaatttcacccggtggtggccaagctgcagatttactgcagtgaagacctgggctcg
ttctacctggacgtgctcaaagaccggctctacaccaccggtgcccactcgctggcccgg
cgcagcgcacaaaccgcgctgtggcaaatcacgcaagcgtttgtgcactggatgtcacct
ttcctgagcttcaccgccgaagaggcttgggccgtgctgggtgcgcaaggcaaaacgcct
gtagccacccgcgactcgatcttcatggacacctacagcacgctggccccggctgacgac
gcgctgctggccaagtgggcccgcatccgcgagatccgtgacctggtcaacaaagacatt
gaggtgctgcgcgccaacggcttggtgggttcatccttgcaagccgaggtggagctcacc
gtggctgcggatgacttcgcgctgctgagcagtctgggggcggatctgaagttcgtcttc
attacgtccgctattgatatgatagctggtgacgctttatccataagggctagcgcctct
aaaggcattaaatgcgagcgttgctggcattacagcgacgccatcggtagcgacgccgct
caccccaccttgtgcccgcgctgcagcagcaacctgtttggcagcggtgaaacccggatc
tttgtctga
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