Rhodococcus antarcticus: RHODO2019_12880
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Entry
RHODO2019_12880 CDS
T09186
Name
(GenBank) cystathionine beta-synthase
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant00260
Glycine, serine and threonine metabolism
rant00270
Cysteine and methionine metabolism
rant01100
Metabolic pathways
rant01110
Biosynthesis of secondary metabolites
rant01230
Biosynthesis of amino acids
Module
rant_M00035
Methionine degradation
rant_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RHODO2019_12880
00270 Cysteine and methionine metabolism
RHODO2019_12880
Enzymes [BR:
rant01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
RHODO2019_12880
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Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Phage_Mu_Gp45
Motif
Other DBs
NCBI-ProteinID:
UZJ24062
LinkDB
All DBs
Position
complement(2639243..2640625)
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AA seq
460 aa
AA seq
DB search
MRIAEHIVDLVGNTPLVRLHSVTAGIGATVAAKVEYLNPGGSVKDRIAVKMVDAAEASGE
LRPGGTIVEPTSGNTGVGLALVAQRRGYHCIFVCPDKVSEDKRNVLRAYGAEVVVCPTSV
PPDHPDSYYSTSDRLVRETEGAWKPNQYANVNGPASHYETTGPEIWADTDGKITHFICGV
GTGGTITGTGRYLKEVSGGKVQVIGVDPEGSVYSGGTGRPYLVEGVGEDFWPTAYDPSIP
DGIEAVSDADAFNMTRRLAREEGLLVGGSCGMATVGALRVAATLPDDALVVVLLPDGGRG
YLSKIFNDDWMSSYGFLRSPLDGHEVQTRVGDVLRGKSGELPDLVHTHPGETVRDAIEIL
REYGVSQMPVVGAEPPVMAGEVAGSVSERDLLDAVFAGRAHLADPVAQHMSPPLPLLGAG
EPVSAATEALGTIDAVMVVDDGKPVGVLTRHDLLGFLSGV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgctgagcacatcgtcgacctcgtcgggaacacccccctggtacggctgcac
tccgtcaccgccgggatcggtgccaccgtcgccgccaaggtcgagtacctgaaccccggt
ggcagcgtgaaggaccgcatcgcggtgaagatggtcgacgccgccgaggccagcggggag
ctccgccccggcgggacgatcgtcgagcccacctcgggcaacaccggtgtcgggctggcc
ctggtggcccagcggcgcggctaccactgcatcttcgtgtgcccggacaaggtcagcgag
gacaagcgcaacgtgttgcgcgcctacggggccgaggtcgtcgtgtgtcccacgtccgtg
ccgccggaccaccccgacagctactactccacctccgaccgtctcgtccgtgagaccgag
ggtgcgtggaagcccaaccagtacgcgaacgtcaacgggcccgccagccactacgagacc
accggtccggagatctgggccgacaccgacgggaagatcacccacttcatctgcggcgtg
ggcaccggcggcaccatcaccgggaccggccgctacctcaaggaggtctccggcggcaag
gtccaggtcatcggcgtggaccccgagggttcggtgtactcgggcgggaccggacggccg
tacctcgtggagggcgtcggcgaggacttctggcccaccgcgtacgacccgtccatcccc
gacggcatcgaggccgtctccgacgcggacgcgttcaacatgacccgccgcctggcccgg
gaggagggccttctcgtgggcggctcctgcgggatggccacggtgggcgcgctgcgcgtg
gcggcgaccctgcccgacgacgcgctcgtggtggtgctgctgcccgacggtggccgcggc
tacctgtccaagatcttcaacgacgactggatgagctcctacggcttcctgcgctccccg
ctggacggccacgaggtgcagacccgcgtgggcgacgtgctgcgcggcaagtccggtgag
ctgcccgacctggtgcacacccaccccggcgagacggtgcgcgacgccatcgagatcctc
cgcgagtacggggtgtcgcagatgcccgtcgtcggtgccgagccgccggtgatggccggc
gaggtggccggcagcgtcagcgagcgcgacctcctcgacgcggtgttcgccggccgcgcc
cacctggccgacccggtggcccagcacatgagcccgcccctgccgctgctcggggccggt
gagcccgtctccgccgccaccgaggcgctcggaaccatcgacgccgtcatggtcgtcgac
gacggaaagcccgtgggcgtgctcacccggcacgacctgctcgggttcctcagcggcgtc
tga
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