Rousettus aegyptiacus (Egyptian rousette): 107517786
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Entry
107517786 CDS
T06036
Gene name
CXCL12
Definition
(RefSeq) stromal cell-derived factor 1 isoform X1
KO
K10031
C-X-C motif chemokine 12
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray04060
Cytokine-cytokine receptor interaction
ray04061
Viral protein interaction with cytokine and cytokine receptor
ray04062
Chemokine signaling pathway
ray04064
NF-kappa B signaling pathway
ray04360
Axon guidance
ray04670
Leukocyte transendothelial migration
ray04672
Intestinal immune network for IgA production
ray04810
Regulation of actin cytoskeleton
ray05163
Human cytomegalovirus infection
ray05200
Pathways in cancer
ray05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
107517786 (CXCL12)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
107517786 (CXCL12)
04061 Viral protein interaction with cytokine and cytokine receptor
107517786 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107517786 (CXCL12)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
107517786 (CXCL12)
04672 Intestinal immune network for IgA production
107517786 (CXCL12)
04062 Chemokine signaling pathway
107517786 (CXCL12)
09158 Development and regeneration
04360 Axon guidance
107517786 (CXCL12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107517786 (CXCL12)
09163 Immune disease
05323 Rheumatoid arthritis
107517786 (CXCL12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
107517786 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and growth factors [BR:
ray04052
]
107517786 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
ray00536
]
107517786 (CXCL12)
Cytokines and growth factors [BR:
ray04052
]
Cytokines
Chemokines
107517786 (CXCL12)
Glycosaminoglycan binding proteins [BR:
ray00536
]
Heparan sulfate / Heparin
Chemokines
107517786 (CXCL12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
107517786
NCBI-ProteinID:
XP_016014399
LinkDB
All DBs
Position
Unknown
AA seq
140 aa
AA seq
DB search
MDAKVVVVLALVLTALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIV
ARLKNNNRQVCIDPKLKWIQEYLEKALNKGRREEKVGKKRKDRKKEATEEEKGCSEKKKL
VIYHLEMDRSALCSCLSRAL
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaggttgtcgtcgtgctggccctcgtgctgactgcgctctgcctcagcgac
ggaaaaccagtcagcctgagctacagatgtccttgtcgattcttcgagagccacgttgcc
agggccaatgtcaagcatctcaaaatcctcaacactccaaactgtgcccttcagattgtg
gcaaggctgaagaataacaacagacaagtgtgcattgacccaaaattgaagtggattcag
gaatacctggagaaagctttaaacaaggggcgcagagaagaaaaagtggggaaaaaaaga
aaagataggaaaaaagaagcgacagaagaagagaaaggctgctcagaaaagaaaaaacta
gttatctaccacctcgagatggaccgcagtgcactctgctcttgtctctcccgtgctttg
taa
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