Pseudoroseomonas cervicalis: PFY06_04655
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Entry
PFY06_04655 CDS
T08750
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rcv
Pseudoroseomonas cervicalis
Pathway
rcv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFY06_04655 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcv03400
]
PFY06_04655 (nth)
Enzymes [BR:
rcv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PFY06_04655 (nth)
DNA repair and recombination proteins [BR:
rcv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFY06_04655 (nth)
Prokaryotic type
PFY06_04655 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WBV44639
LinkDB
All DBs
Position
complement(955706..956359)
Genome browser
AA seq
217 aa
AA seq
DB search
MSAAQAALFVRSLAQANPAPETELHYTSPYTLLVAVALSAQATDVSVNKATATLFPLADT
PEKMLALGEEGVGEHIRRIGLWKSKAKNVVALSRLLIERHGGQVPADRAALEALPGVGRK
TANVVLNVAFGEEAMAVDTHIFRLGNRTGLAPGKTPRAVEDALMRRVPPELLRDAHHWLI
LHGRYVCKARLPECWRCVAREHCNYTDKVFSRLPPSR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgcgcaggcggcgctgttcgtgcgcagcctggcccaggccaacccggcgccg
gagacggagctgcactacacctccccctacacgctgctggtggcggtggcgctgtcggcc
caggccaccgatgtctcggtcaacaaggccacggccacgctgttcccgctggccgacacg
ccggaaaagatgctggccctcggcgaggagggggtgggcgagcacatccgccgcatcggg
ctgtggaagtccaaggcgaagaacgtcgtcgccctgtcccgcctgctgatcgagcggcat
ggcggccaggtgccggcggaccgcgcggcgctggaggcgctgcccggcgtcggccgcaag
accgccaatgtcgtgctgaacgtggccttcggcgaggaggcgatggcggtggacacgcac
atcttccgcctgggcaaccgcaccggcctggcgcccggcaagacgccgcgggcggtggag
gacgcgctgatgcggcgcgtgccgcccgagctgctgcgcgacgcgcatcactggctgatc
ctgcacgggcgctatgtctgcaaggcgcggctgccggaatgctggcgctgcgtggcgcgc
gagcactgcaactacaccgacaaggttttttccaggctgccgccgtcgcgttga
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